RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 GEN1Q17RS7 908 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 EOGTQ5NDL2 527 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 BRMS1LQ5PSV4 323 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 MCOLN2Q8IZK6 566 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 LGI2Q8N0V4 545 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 HHIPQ96QV1 700 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 SELENOOQ9BVL4 669 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 ZDHHC4Q9NPG8 344 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 TAS2R14Q9NYV8 317 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 STIM2Q9P246 746 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 HCN2Q9UL51 889 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 SMG5Q9UPR3 1016 aaKnown RBP22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 PAXBP1Q9Y5B6 917 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 DNAH14Q0VDD8 3507 aa22.97■■□□□ 1.27
SMARCD2-206ENST00000577990 F5H5T6 163 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 GJB6O95452 261 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 KRT3P12035 628 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 FNTBP49356 437 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 RPS24P62847 133 aaKnown RBP22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 TDRD12Q587J7 1177 aaKnown RBP22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 EGFLAMQ63HQ2 1017 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 HEATR6Q6AI08 1181 aaKnown RBP22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 DNAJC24Q6P3W2 148 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 BNIPLQ7Z465 357 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 CAMKK1Q8N5S9 505 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 ZNF557Q8N988 423 aaPredicted RBP22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 JOSD2Q8TAC2 188 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 RXFP2Q8WXD0 754 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 PRMT1Q99873 361 aaKnown RBP22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 EPC1Q9H2F5 836 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 WDCPQ9H6R7 721 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 ARHGEF38Q9NXL2 777 aa22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 BZW2Q9Y6E2 419 aaKnown RBP22.96■■□□□ 1.27
SMARCD2-206ENST00000577990 C2CD4BA6NLJ0 364 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 TMCO5BA8MYB1 307 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 SGK1O00141 431 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 DDX3XO00571 662 aaKnown RBP eCLIP22.95■■□□□ 1.261e-10■■■□□ 19.1
SMARCD2-206ENST00000577990 ADAM23O75077 832 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 ADCY5O95622 1261 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 APBB3O95704 486 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 PDGFRAP16234 1089 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 HLA-FP30511 346 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 SDC4P31431 198 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 CASP14P31944 242 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 RDXP35241 583 aaKnown RBP22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 CRY1Q16526 586 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 HGSNATQ68CP4 663 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 SPECC1LQ69YQ0 1117 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 SDK1Q7Z5N4 2213 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 LONP2Q86WA8 852 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 MFN1Q8IWA4 741 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 CFAP52Q8N1V2 620 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 DDX51Q8N8A6 666 aaKnown RBP eCLIP22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 TSTD1Q8NFU3 115 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 WFIKKN2Q8TEU8 576 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 VCPIP1Q96JH7 1222 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 TKTL2Q9H0I9 626 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 NCDNQ9UBB6 729 aa22.95■■□□□ 1.26
SMARCD2-206ENST00000577990 RALGAPA1Q6GYQ0 2036 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 TCRBV5S1A1TA0A578 114 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 SIGLEC16A6NMB1 481 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 PAGE1O75459 146 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 GZMAP12544 262 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 PTPN9P43378 593 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 DGKEP52429 567 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 ATXN1P54253 815 aaKnown RBP22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 ATP11AP98196 1134 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 TRIM14Q14142 442 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 EIF4HQ15056 248 aaKnown RBP22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 LPAL2Q16609 132 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 CCDC14Q49A88 953 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 WDR5BQ86VZ2 330 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 VSTM4Q8IW00 320 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 WFDC5Q8TCV5 224 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 UCMAQ8WVF2 138 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 ABCB8Q9NUT2 735 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 GGA2Q9UJY4 613 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 HS3ST4Q9Y661 456 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 CACNA1AO00555 2505 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 SPAG17Q6Q759 2223 aa22.94■■□□□ 1.26
SMARCD2-206ENST00000577990 EML5Q05BV3 1969 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 CCDC163A0A0D9SF12 145 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 ENDOD1O94919 500 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 LUC7L3O95232 432 aaKnown RBP22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 SERPING1P05155 500 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 PABPC1P11940 636 aaKnown RBP22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 HNRNPLP14866 589 aaKnown RBP eCLIP22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 RRM1P23921 792 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 NTSR1P30989 418 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 RFC1P35251 1148 aaPredicted RBP22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 PXNP49023 591 aaPredicted RBP22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 CDH18Q13634 790 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 AUHQ13825 339 aaKnown RBP22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 C15orf59Q2T9L4 293 aaPredicted RBP22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 RABGAP1LQ5R372 815 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 TTC39BQ5VTQ0 682 aaPredicted RBP22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 TMEM92Q6UXU6 159 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 CCDC117Q8IWD4 279 aaPredicted RBP22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 CHPFQ8IZ52 775 aa22.93■■□□□ 1.26
SMARCD2-206ENST00000577990 AHI1Q8N157 1196 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms