RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 TTC28Q96AY4 2481 aa7.35□□□□□ -1.23
CASC3-205ENST00000577605 BDP1A6H8Y1 2624 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 TYW5A2RUC4 315 aaKnown RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 TBC1D3BA6NDS4 549 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 PRR23AA6NEV1 266 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 YJEFN3A6XGL0 299 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 BECN2A8MW95 431 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 E7ENQ6 273 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 K7EQS6 105 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 TULP2O00295 520 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 FOXN3O00409 490 aaPredicted RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 CAPN9O14815 690 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 DNAJC6O75061 913 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 TULP3O75386 442 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 APBB3O95704 486 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 EGFP01133 1207 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 PENKP01210 267 aaPredicted RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 IRF1P10914 325 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 TDGF1P13385 188 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 NCAM1P13591 858 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 TYRP14679 529 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 CORO1AP31146 461 aaKnown RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 GBP1P32455 592 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 PGFP49763 221 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 TYRO3Q06418 890 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 DRAP1Q14919 205 aaPredicted RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 EIF4HQ15056 248 aaKnown RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 KRT31Q15323 416 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 FILIP1LQ4L180 1135 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 ADGRF1Q5T601 910 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 GRAMD4Q6IC98 578 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 PPP1R2P3Q6NXS1 205 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 TOGARAM2Q6ZUX3 1019 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 BHLHA9Q7RTU4 235 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 TMEM25Q86YD3 366 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 CCDC117Q8IWD4 279 aaPredicted RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 IPO4Q8TEX9 1081 aaKnown RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 USP33Q8TEY7 942 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 UCMAQ8WVF2 138 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 RUBCNQ92622 972 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 LOXL4Q96JB6 756 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 PPP1R13BQ96KQ4 1090 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 PPP1R9BQ96SB3 815 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 ZSWIM1Q9BR11 485 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 BBS2Q9BXC9 721 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 NAA15Q9BXJ9 866 aaKnown RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 SIX2Q9NPC8 291 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 ST7Q9NRC1 585 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 RBM12Q9NTZ6 932 aaKnown RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 AGO1Q9UL18 857 aaKnown RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 TLR6Q9Y2C9 796 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 PAXBP1Q9Y5B6 917 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 MUC3AQ02505 3323 aa7.34□□□□□ -1.23
CASC3-205ENST00000577605 NUP210Q8TEM1 1887 aaPredicted RBP7.34□□□□□ -1.23
CASC3-205ENST00000577605 KMT2EQ8IZD2 1858 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 LGALS16A8MUM7 142 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 NEDD8-MDP1E9PL57 170 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 K7ESF4 209 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 HSF2BPO75031 334 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 LRP3O75074 770 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 F9P00740 461 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 IGLV3-27P01718 113 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 KLKB1P03952 638 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 HNRNPLP14866 589 aaKnown RBP eCLIP7.33□□□□□ -1.24
CASC3-205ENST00000577605 CYP11B1P15538 503 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 ZNF18P17022 549 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 SDHBP21912 280 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 MZF1P28698 734 aaPredicted RBP7.33□□□□□ -1.24
CASC3-205ENST00000577605 CDH5P33151 784 aaPredicted RBP7.33□□□□□ -1.24
CASC3-205ENST00000577605 STAT1P42224 750 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 DPP6P42658 865 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 DGKGP49619 791 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 RGS7P49802 495 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 COPB1P53618 953 aaKnown RBP7.33□□□□□ -1.24
CASC3-205ENST00000577605 EPHA4P54764 986 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 OXCT1P55809 520 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 TBX4P57082 545 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 CDK17Q00537 523 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 SATB1Q01826 763 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 CENPCQ03188 943 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 KCNMA1Q12791 1236 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 PDCLQ13371 301 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 RAPGEF1Q13905 1077 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 GAS6Q14393 721 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 DMC1Q14565 340 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 GAB4Q2WGN9 574 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 RNFT1Q5M7Z0 435 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 LAIR1Q6GTX8 287 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 DENND1BQ6P3S1 775 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 TRIM72Q6ZMU5 477 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 Q6ZS52 159 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 C11orf57Q6ZUT1 292 aaPredicted RBP7.33□□□□□ -1.24
CASC3-205ENST00000577605 ARCQ7LC44 396 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 DENND1CQ8IV53 801 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 TERB1Q8NA31 727 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 ZNF397Q8NF99 534 aaPredicted RBP7.33□□□□□ -1.24
CASC3-205ENST00000577605 NEK11Q8NG66 645 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 RPLP0P6Q8NHW5 317 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 FAM149B1Q96BN6 582 aa7.33□□□□□ -1.24
CASC3-205ENST00000577605 IQCDQ96DY2 449 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms