RNA–Protein interactions for RNA: ENST00000577198.5

KRT18P55-201, Transcript of keratin 18 pseudogene 55, humanhuman

TSL 1 (best) BASIC

Gene KRT18P55, Length 1,950 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18P55-201ENST00000577198 PRPF39Q86UA1 669 aaKnown RBP21.91■■□□□ 1.1
KRT18P55-201ENST00000577198 ATAD1Q8NBU5 361 aa21.91■■□□□ 1.1
KRT18P55-201ENST00000577198 ZNF784Q8NCA9 323 aaPredicted RBP21.91■■□□□ 1.1
KRT18P55-201ENST00000577198 CHMP6Q96FZ7 201 aa21.91■■□□□ 1.1
KRT18P55-201ENST00000577198 C8orf48Q96LL4 319 aa21.91■■□□□ 1.1
KRT18P55-201ENST00000577198 TRIM56Q9BRZ2 755 aaKnown RBP21.91■■□□□ 1.1
KRT18P55-201ENST00000577198 OSBPL2Q9H1P3 480 aa21.91■■□□□ 1.1
KRT18P55-201ENST00000577198 TTLL3Q9Y4R7 772 aa21.91■■□□□ 1.1
KRT18P55-201ENST00000577198 GREB1Q4ZG55 1949 aa21.91■■□□□ 1.1
KRT18P55-201ENST00000577198 NT5C1B-RDH14C9J2C7 533 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 PPP1R12AO14974 1030 aaPredicted RBP21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 VNN2O95498 520 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 MNX1P50219 401 aaPredicted RBP21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 ATN1P54259 1190 aaPredicted RBP21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 NR1H3Q13133 447 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 KLHL38Q2WGJ6 581 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 CTXN3Q4LDR2 81 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 ANKRD42Q8N9B4 389 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 EPAS1Q99814 870 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 GORASP1Q9BQQ3 440 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 TRIM62Q9BVG3 475 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 MICAL3Q7RTP6 2002 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 KCNK1O00180 336 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 OPHN1O60890 802 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 CXCL10P02778 98 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 ALDH2P05091 517 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 EPHB2P29323 1055 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 CCL23P55773 120 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 KBTBD12Q3ZCT8 623 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 BCL7CQ8WUZ0 217 aaPredicted RBP21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 DPF3Q92784 378 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 APBB2Q92870 758 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 CFAP36Q96G28 342 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 CRISPLD1Q9H336 500 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 TRABDQ9H4I3 376 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 SEPT10Q9P0V9 454 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 SCML2Q9UQR0 700 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 RAD54BQ9Y620 910 aa21.9■■□□□ 1.1
KRT18P55-201ENST00000577198 EBAG9O00559 213 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 TBC1D4O60343 1298 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 GALTP07902 379 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 PTPN3P26045 913 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 PSMB4P28070 264 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 FDFT1P37268 417 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 PPIDQ08752 370 aaKnown RBP21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 NPAS4Q8IUM7 802 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 LRRC34Q8IZ02 419 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 NUP93Q8N1F7 819 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 DEPDC1BQ8WUY9 529 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 RNF34Q969K3 372 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 CYTH2Q99418 400 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 IL37Q9NZH6 218 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 PCDHB5Q9Y5E4 795 aa21.89■■□□□ 1.09
KRT18P55-201ENST00000577198 SPAG7O75391 227 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 SOAT2O75908 522 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 CCL5P13501 91 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 KRT15P19012 456 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 ZNF135P52742 658 aaPredicted RBP21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 GALNT2Q10471 571 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 RTP2Q5QGT7 225 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 FUT10Q6P4F1 479 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 TAS1R1Q7RTX1 841 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 PDCD7Q8N8D1 485 aaKnown RBP21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 GPR152Q8TDT2 470 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 DENND1AQ8TEH3 1009 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 ZC3H7BQ9UGR2 993 aaKnown RBP21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 LRFN2Q9ULH4 789 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 PAGE1O75459 146 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 SPAG6O75602 509 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 ATP2A2P16615 1042 aaKnown RBP21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 MAGEA11P43364 429 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 WDR4P57081 412 aaKnown RBP21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 FAAP100Q0VG06 881 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 BRMS1LQ5PSV4 323 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 MANEALQ5VSG8 457 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 UNC5AQ6ZN44 842 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 ANKRD33Q7Z3H0 272 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 C4orf33Q8N1A6 199 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 ZSCAN18Q8TBC5 510 aaPredicted RBP21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 SLC44A1Q8WWI5 657 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 LRRC39Q96DD0 335 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 HAPLN3Q96S86 360 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 RNF208Q9H0X6 261 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 SMYD2Q9NRG4 433 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 IGSF9Q9P2J2 1179 aa21.88■■□□□ 1.09
KRT18P55-201ENST00000577198 CXorf49A8MYA2 514 aaPredicted RBP21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 TRIM66O15016 1216 aa21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 PRPF4O43172 522 aaKnown RBP eCLIP21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 PARP6Q2NL67 630 aa21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 ZNF280DQ6N043 979 aa21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 PDZD4Q76G19 769 aaPredicted RBP21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 HDAC11Q96DB2 347 aa21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 VWCEQ96DN2 955 aa21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 EBNA1BP2Q99848 306 aaKnown RBP21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 SIK2Q9H0K1 926 aa21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 HIPK3Q9H422 1215 aa21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 XAB2Q9HCS7 855 aaKnown RBP21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 EIF2B3Q9NR50 452 aaKnown RBP21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 FAM92AA1XBS5 289 aa21.87■■□□□ 1.09
KRT18P55-201ENST00000577198 FAM47DPA6NHR8 397 aa21.87■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms