RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 C4orf50Q6ZRC1 276 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 DENND5BQ6ZUT9 1274 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 UNC13DQ70J99 1090 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 ZNF765Q7L2R6 523 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 CACNA2D4Q7Z3S7 1137 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 FILIP1Q7Z7B0 1213 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 CPA6Q8N4T0 437 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 CCDC33Q8N5R6 958 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 XXYLT1Q8NBI6 393 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 MYCBPAPQ8TBZ2 947 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 SPATA18Q8TC71 538 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 CD101Q93033 1021 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 ATP2A3Q93084 1043 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 WBP2Q969T9 261 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 SPATA17Q96L03 361 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 FERD3LQ96RJ6 166 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 FNBP1Q96RU3 617 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 MIPEPQ99797 713 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 RTKNQ9BST9 563 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 TPSD1Q9BZJ3 242 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 LRRC27Q9C0I9 530 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 SDCBP2Q9H190 292 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 XYLT2Q9H1B5 865 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 CUEDC2Q9H467 287 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 SMYD3Q9H7B4 428 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 KIAA1586Q9HCI6 787 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 ZDHHC4Q9NPG8 344 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 TRPM5Q9NZQ8 1165 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 CHORDC1Q9UHD1 332 aaPredicted RBP6.61□□□□□ -1.35
NUP88-212ENST00000576708 ZMYM5Q9UJ78 669 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 ADAM30Q9UKF2 790 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 ARHGAP26Q9UNA1 814 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 CPQQ9Y646 472 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 ATG2BQ96BY7 2078 aa6.61□□□□□ -1.35
NUP88-212ENST00000576708 CACNA1AO00555 2505 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 SLC22A31A6NKX4 558 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 LRRIQ3A6PVS8 624 aaPredicted RBP6.6□□□□□ -1.35
NUP88-212ENST00000576708 A8MXQ7 604 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 K7EQS6 105 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 SLC30A4O14863 429 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 KLRC4O43908 158 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 EXOC3O60645 756 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 ATG13O75143 517 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 TACC1O75410 805 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 LRIG2O94898 1065 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 EPN2O95208 641 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 VNN1O95497 513 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 CYP17A1P05093 508 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 HNRNPLP14866 589 aaKnown RBP eCLIP6.6□□□□□ -1.35
NUP88-212ENST00000576708 SDHBP21912 280 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 PGFP49763 221 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 DGKEP52429 567 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 DLG4P78352 724 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 AMPD2Q01433 879 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 STK4Q13043 487 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 BIRC3Q13489 604 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 TRPC3Q13507 836 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 BMT2Q1RMZ1 405 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 AASDHQ4L235 1098 aaPredicted RBP6.6□□□□□ -1.35
NUP88-212ENST00000576708 C2orf27AQ580R0 203 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 TMEM201Q5SNT2 666 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 EMC10Q5UCC4 262 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 RESP18Q5W5W9 173 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 SLC6A19Q695T7 634 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 TCEAL6Q6IPX3 200 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 PAQR9Q6ZVX9 377 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 TTC30AQ86WT1 665 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 MRPL41Q8IXM3 137 aaKnown RBP6.6□□□□□ -1.35
NUP88-212ENST00000576708 FSIP1Q8NA03 581 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 B3GALNT2Q8NCR0 500 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 KIAA0895Q8NCT3 520 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 SCAMP5Q8TAC9 235 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 NETO1Q8TDF5 533 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 TCEAL3Q969E4 200 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 SNX21Q969T3 373 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 C8orf48Q96LL4 319 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 KCNK16Q96T55 309 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 DUSP23Q9BVJ7 150 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 TTLL2Q9BWV7 592 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 DUSP15Q9H1R2 295 aaPredicted RBP6.6□□□□□ -1.35
NUP88-212ENST00000576708 CFAP97Q9P2B7 532 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 CEP250Q9BV73 2442 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 ZNF638Q14966 1978 aaKnown RBP6.6□□□□□ -1.35
NUP88-212ENST00000576708 GREB1Q4ZG55 1949 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 ANAPC1Q9H1A4 1944 aa6.6□□□□□ -1.35
NUP88-212ENST00000576708 UBE4BO95155 1302 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 A0A1B0GVL5 298 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 PVALEFA0A1B0GWK0 134 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 TRIM24O15164 1050 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 GSC2O15499 205 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 LRP3O75074 770 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 KRT37O76014 449 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 BEST1O76090 585 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 SLITRK5O94991 958 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 ATE1O95260 518 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 NFATC1O95644 943 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 APBB3O95704 486 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 OLFM2O95897 454 aa6.59□□□□□ -1.35
NUP88-212ENST00000576708 OAS1P00973 400 aaKnown RBP6.59□□□□□ -1.35
NUP88-212ENST00000576708 C4BPAP04003 597 aaKnown RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms