RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 DNAJC14Q6Y2X3 702 aaPredicted RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 KYAT3Q6YP21 454 aaKnown RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 AMIGO3Q86WK7 504 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 APOBEC3FQ8IUX4 373 aaKnown RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 APLFQ8IW19 511 aaPredicted RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 MICU2Q8IYU8 434 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 FAM156AQ8NDB6 213 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 NDRG1Q92597 394 aaKnown RBP18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 KIF17Q9P2E2 1029 aa18.3■□□□□ 0.52
ATPAF1-214ENST00000576409 UBA1P22314 1058 aaKnown RBP18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 INPP1P49441 399 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 BCAT1P54687 386 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 FASTKQ14296 549 aaKnown RBP18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 TATDN1Q6P1N9 297 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 TFAP2DQ7Z6R9 452 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 KIAA2013Q8IYS2 634 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 DDHD1Q8NEL9 900 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 SLC44A1Q8WWI5 657 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 RMND5BQ96G75 393 aaPredicted RBP18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 CASS4Q9NQ75 786 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 SETD4Q9NVD3 440 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 RBM22Q9NW64 420 aaKnown RBP eCLIP18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 TSC22D4Q9Y3Q8 395 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 LTN1O94822 1766 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 CNTNAP2Q9UHC6 1331 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 SYNDIG1LA6NDD5 238 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 TNFAIP8O95379 198 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 SLC6A3Q01959 620 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 TRIM16LQ309B1 348 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 AGAP9Q5VTM2 703 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 METTL7BQ6UX53 244 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 KIAA0319LQ8IZA0 1049 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 RIN3Q8TB24 985 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 PLLPQ9Y342 182 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 HEATR9A2RTY3 570 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 ERBB2P04626 1255 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 ITGA2BP08514 1039 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 PEX2P28328 305 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 ZNF143P52747 638 aaPredicted RBP18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 ADCK1Q86TW2 530 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 SNX31Q8N9S9 440 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 CHST13Q8NET6 341 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 RNF217Q8TC41 542 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 P2RX7Q99572 595 aaKnown RBP18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 APOL5Q9BWW9 433 aa18.29■□□□□ 0.52
ATPAF1-214ENST00000576409 ASB14A6NK59 587 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 ZNF839A8K0R7 811 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 TRDMT1O14717 391 aaKnown RBP18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 MRASO14807 208 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 RHOBTB1O94844 696 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 FKBP9O95302 570 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 CNTFP26441 200 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 PRKAA1Q13131 559 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 NFYCQ13952 458 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 PPP1R15BQ5SWA1 713 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 ANO7Q6IWH7 933 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 FKBP9P1Q75LS8 142 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 NIPA1Q7RTP0 329 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 EMID1Q96A84 441 aaPredicted RBP18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 CHADO15335 359 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 YWHAZP63104 245 aaKnown RBP18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 CTBP1Q13363 440 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 C10orf82Q8WW14 230 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 DNAJC1Q96KC8 554 aaKnown RBP18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 CRYL1Q9Y2S2 319 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 RIMBP3CA6NJZ7 1639 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 RIMBP3BA6NNM3 1639 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 RIMBP3Q9UFD9 1639 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 PTGES3LE9PB15 166 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 CLOCKO15516 846 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 TOP3BO95985 862 aaKnown RBP18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 BPGMP07738 259 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 CCDC85BQ15834 202 aaPredicted RBP18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 DCAF4L1Q3SXM0 396 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 ACBD5Q5T8D3 534 aaPredicted RBP18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 C15orf52Q6ZUT6 534 aaKnown RBP18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 UNC5BQ8IZJ1 945 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 EBF2Q9HAK2 575 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 GID8Q9NWU2 228 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 LGALS13Q9UHV8 139 aa18.28■□□□□ 0.52
ATPAF1-214ENST00000576409 ATP6V1B2P21281 511 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 CYP1B1Q16678 543 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 KCTD4Q8WVF5 259 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 SNX19Q92543 992 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 FAM192AQ9GZU8 254 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 C4BPAP04003 597 aaKnown RBP18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 SERPINA6P08185 405 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 HSPA1AP0DMV8 641 aaKnown RBP18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 HSPA1BP0DMV9 641 aaKnown RBP18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 UNGP13051 313 aaPredicted RBP18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 TRPC1P48995 793 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 NEK3P51956 506 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 FBXO47Q5MNV8 452 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 STYK1Q6J9G0 422 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 TSPAN17Q96FV3 270 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 CERS2Q96G23 380 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 SYT15Q9BQS2 421 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 C17orf80Q9BSJ5 609 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 CYP3A43Q9HB55 503 aa18.27■□□□□ 0.52
ATPAF1-214ENST00000576409 DSEQ9UL01 958 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms