RNA–Protein interactions for RNA: ENST00000576218.5

SMG6-220, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 902 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-220ENST00000576218 CYP1A1P04798 512 aaPredicted RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 ATP5BP06576 529 aaKnown RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 DESP17661 470 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 CHRNB2P17787 502 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 POLR2EP19388 210 aaKnown RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 TNFAIP3P21580 790 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 HLA-FP30511 346 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 UBASH3AP57075 661 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 FANCCQ00597 558 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 TTC39BQ5VTQ0 682 aaPredicted RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 SFMBT2Q5VUG0 894 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 KIAA1324Q6UXG2 1013 aaKnown RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 RASSF3Q86WH2 238 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 DCLK2Q8N568 766 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 FAM160A2Q8N612 972 aaPredicted RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 SORCS1Q8WY21 1168 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 P2RY11Q96G91 374 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 PRICKLE1Q96MT3 831 aaPredicted RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 NAP1L5Q96NT1 182 aaPredicted RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 RPRD1AQ96P16 312 aaPredicted RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 SELENOOQ9BVL4 669 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 SIK2Q9H0K1 926 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 MYO6Q9UM54 1294 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 VPS13AQ96RL7 3174 aa15.79■□□□□ 0.12
SMG6-220ENST00000576218 RIF1Q5UIP0 2472 aaKnown RBP15.79■□□□□ 0.12
SMG6-220ENST00000576218 PTPRZ1P23471 2315 aaPredicted RBP15.78■□□□□ 0.12
SMG6-220ENST00000576218 LUC7L3O95232 432 aaKnown RBP15.78■□□□□ 0.12
SMG6-220ENST00000576218 EPHX1P07099 455 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 RETP07949 1114 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 HNRNPLP14866 589 aaKnown RBP eCLIP15.78■□□□□ 0.123e-10■■■■□ 26.4
SMG6-220ENST00000576218 MMP8P22894 467 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 SDC4P31431 198 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 ST8SIA6P61647 398 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 ZNF234Q14588 700 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 CLEC16AQ2KHT3 1053 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 SLC25A52Q3SY17 297 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 BRMS1LQ5PSV4 323 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 RNF219Q5W0B1 726 aaPredicted RBP15.78■□□□□ 0.12
SMG6-220ENST00000576218 MBLAC2Q68D91 279 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 KBTBD6Q86V97 674 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 GPR161Q8N6U8 529 aaKnown RBP15.78■□□□□ 0.12
SMG6-220ENST00000576218 CYB5D2Q8WUJ1 264 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 CFAP57Q96MR6 1250 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 TBCBQ99426 244 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 NPY6RQ99463 290 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 TKTL2Q9H0I9 626 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 TSPY26PQ9H489 355 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 PIGVQ9NUD9 493 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 TMEM51Q9NW97 253 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 THAP10Q9P2Z0 257 aaPredicted RBP15.78■□□□□ 0.12
SMG6-220ENST00000576218 FAM186AA6NE01 2351 aa15.78■□□□□ 0.12
SMG6-220ENST00000576218 WASH3PC4AMC7 463 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 DCLK1O15075 740 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 CD70P32970 193 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 RDXP35241 583 aaKnown RBP15.77■□□□□ 0.12
SMG6-220ENST00000576218 FLT3P36888 993 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 IL12RB1P42701 662 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 ATP11AP98196 1134 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 CENPCQ03188 943 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 SPEM2Q0P670 501 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 CDO1Q16878 200 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 PPP1R2P3Q6NXS1 205 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 DNAJC24Q6P3W2 148 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 LRRC31Q6UY01 552 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 EMC1Q8N766 993 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 FIBINQ8TAL6 211 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 WFDC5Q8TCV5 224 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 RLN3Q8WXF3 142 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 GABRG3Q99928 467 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 NUP58Q9BVL2 599 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 CALCOCO1Q9P1Z2 691 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 VANGL2Q9ULK5 521 aa15.77■□□□□ 0.12
SMG6-220ENST00000576218 A0A1B0GVM2 712 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 TCAF2A6NFQ2 919 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 TMCO5BA8MYB1 307 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 PAGE1O75459 146 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 ACADMP11310 421 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 KRT3P12035 628 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 UNGP13051 313 aaPredicted RBP15.76■□□□□ 0.11
SMG6-220ENST00000576218 PDGFRAP16234 1089 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 GABRG2P18507 467 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 GGCXP38435 758 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 DHPSP49366 369 aaPredicted RBP15.76■□□□□ 0.11
SMG6-220ENST00000576218 KLHL30Q0D2K2 578 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 LMAN2Q12907 356 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 NR1I3Q14994 352 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 ARL13BQ3SXY8 428 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 PLK5Q496M5 336 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 TDRD12Q587J7 1177 aaKnown RBP15.76■□□□□ 0.11
SMG6-220ENST00000576218 KIAA1211LQ6NV74 962 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 LRSAM1Q6UWE0 723 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 CIR1Q86X95 450 aaPredicted RBP15.76■□□□□ 0.11
SMG6-220ENST00000576218 CACUL1Q86Y37 369 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.76■□□□□ 0.11
SMG6-220ENST00000576218 PCDHB18PQ96TA0 734 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 IFNKQ9P0W0 207 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 KIAA1522Q9P206 1035 aaPredicted RBP15.76■□□□□ 0.11
SMG6-220ENST00000576218 HCN2Q9UL51 889 aa15.76■□□□□ 0.11
SMG6-220ENST00000576218 EP300Q09472 2414 aaPredicted RBP15.76■□□□□ 0.11
SMG6-220ENST00000576218 MYO15AQ9UKN7 3530 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms