RNA–Protein interactions for RNA: ENST00000575882.5

TOM1L1-221, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TOM1L1, Length 2,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-221ENST00000575882 SFT2D3Q587I9 215 aa17.7■□□□□ 0.42
TOM1L1-221ENST00000575882 PGM2L1Q6PCE3 622 aa17.7■□□□□ 0.42
TOM1L1-221ENST00000575882 PYROXD2Q8N2H3 581 aa17.7■□□□□ 0.42
TOM1L1-221ENST00000575882 LPIN3Q9BQK8 851 aa17.7■□□□□ 0.42
TOM1L1-221ENST00000575882 C11orf84Q9BUA3 381 aaPredicted RBP17.7■□□□□ 0.42
TOM1L1-221ENST00000575882 ZDHHC7Q9NXF8 308 aa17.7■□□□□ 0.42
TOM1L1-221ENST00000575882 AKT3Q9Y243 479 aa17.7■□□□□ 0.42
TOM1L1-221ENST00000575882 EVPLQ92817 2033 aa17.7■□□□□ 0.42
TOM1L1-221ENST00000575882 ZNF195O14628 629 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 DGKIO75912 1065 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 ALOX15P16050 662 aaPredicted RBP17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 CDK7P50613 346 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 BTKQ06187 659 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 DALRD3Q5D0E6 543 aaKnown RBP17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 ZDHHC17Q8IUH5 632 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 DEFB107AQ8IZN7 70 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 NETO2Q8NC67 525 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 HIPK4Q8NE63 616 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 JADE3Q92613 823 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 CENPIQ92674 756 aaPredicted RBP17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 CMTM5Q96DZ9 223 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 OLFM3Q96PB7 478 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 MPHOSPH6Q99547 160 aaKnown RBP17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 CCDC28BQ9BUN5 200 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 CEP41Q9BYV8 373 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 LOC100653049A0A140TA62 436 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 KRT34O76011 436 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 VTNP04004 478 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 MYL4P12829 197 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 ITGAXP20702 1163 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 TYK2P29597 1187 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 SNX16P57768 344 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 NAB1Q13506 487 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 CUL3Q13618 768 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 ITGA9Q13797 1035 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 EFCAB3Q8N7B9 438 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 CNKSR2Q8WXI2 1034 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 KLHL4Q9C0H6 718 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 VCX3BQ9H321 246 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 ZNF358Q9NW07 568 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 SYBUQ9NX95 663 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 TXNDC16Q9P2K2 825 aa17.69■□□□□ 0.42
TOM1L1-221ENST00000575882 TRIP11Q15643 1979 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 ADCY6O43306 1168 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 ERVK-10P10266 1014 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 INSRRP14616 1297 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 YY1P25490 414 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 PEX2P28328 305 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 GSTT1P30711 240 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 DEUP1Q05D60 604 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 KYAT1Q16773 422 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 INSCQ1MX18 579 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 SOWAHAQ2M3V2 549 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 TCHHL1Q5QJ38 904 aaPredicted RBP17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 RASIP1Q5U651 963 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 CES3Q6UWW8 571 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 HPS6Q86YV9 775 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 EGFL6Q8IUX8 553 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 ARHGAP18Q8N392 663 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 PHTF2Q8N3S3 785 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 GDPD5Q8WTR4 605 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 CAMKK2Q96RR4 588 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 GGA3Q9NZ52 723 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 POMPQ9Y244 141 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 HACD1B0YJ81 288 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 RNF103O00237 685 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 ZMPSTE24O75844 475 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 TXNP10599 105 aaKnown RBP17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 LCP1P13796 627 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 SERPINB6P35237 376 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 HARS2P49590 506 aaKnown RBP17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 AQP4P55087 323 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 POU5F1BQ06416 359 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 MSLNQ13421 630 aaPredicted RBP17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 FRMD7Q6ZUT3 714 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 SLC26A9Q7LBE3 791 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 HACE1Q8IYU2 909 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 ST13P4Q8IZP2 240 aaPredicted RBP17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 C7orf31Q8N865 590 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 TRPM4Q8TD43 1214 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 EIF2B3Q9NR50 452 aaKnown RBP17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 ERAP1Q9NZ08 941 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 GTF2IRD1Q9UHL9 959 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 USP3Q9Y6I4 520 aa17.68■□□□□ 0.42
TOM1L1-221ENST00000575882 SF3B1O75533 1304 aaKnown RBP eCLIP17.68■□□□□ 0.429e-6■■■■■ 68.9
TOM1L1-221ENST00000575882 PPEF2O14830 753 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 DCXO43602 365 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 MFSD11O43934 449 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 CPA3P15088 417 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 MX2P20592 715 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 ARL4AP40617 200 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 TBL3Q12788 808 aaKnown RBP17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 MED21Q13503 144 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 CNPY1Q3B7I2 92 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 LIN52Q52LA3 116 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 CMC1Q7Z7K0 106 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 AZIN2Q96A70 460 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 CENPKQ9BS16 269 aa17.67■□□□□ 0.42
TOM1L1-221ENST00000575882 SPATA16Q9BXB7 569 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms