RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 CNDP2Q96KP4 475 aaKnown RBP10.4□□□□□ -0.74
CALCOCO2-227ENST00000575560 LMLNQ96KR4 655 aa10.4□□□□□ -0.74
CALCOCO2-227ENST00000575560 SLC6A18Q96N87 628 aa10.4□□□□□ -0.74
CALCOCO2-227ENST00000575560 FCRL3Q96P31 734 aaPredicted RBP10.4□□□□□ -0.74
CALCOCO2-227ENST00000575560 IMPG2Q9BZV3 1241 aa10.4□□□□□ -0.74
CALCOCO2-227ENST00000575560 NIF3L1Q9GZT8 377 aa10.4□□□□□ -0.74
CALCOCO2-227ENST00000575560 NCKAP1Q9Y2A7 1128 aa10.4□□□□□ -0.74
CALCOCO2-227ENST00000575560 HBS1LQ9Y450 684 aaKnown RBP10.4□□□□□ -0.74
CALCOCO2-227ENST00000575560 AK5Q9Y6K8 562 aa10.4□□□□□ -0.74
CALCOCO2-227ENST00000575560 TEX51A0A1B0GUA7 166 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 A0A1W2PR77 199 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 WNT9AO14904 365 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 LATS1O95835 1130 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 ITGAVP06756 1048 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 SLFN14P0C7P3 912 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 PABPC1P11940 636 aaKnown RBP10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 PDIA4P13667 645 aaKnown RBP10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 POLR2EP19388 210 aaKnown RBP10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 GCLMP48507 274 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 SGSHP51688 502 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 TKTL1P51854 596 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 RAD23BP54727 409 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 PPP3CAQ08209 521 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 KCNJ12Q14500 433 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 TTC31Q49AM3 519 aaPredicted RBP10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 ZNF394Q53GI3 561 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 MPP7Q5T2T1 576 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 HES3Q5TGS1 186 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 ARHGAP17Q68EM7 881 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 NCEH1Q6PIU2 408 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 PCSK4Q6UW60 755 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 GPR155Q7Z3F1 870 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 ZNF605Q86T29 641 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 GRAMD1CQ8IYS0 662 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 EID2Q8N6I1 236 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 ANKRD52Q8NB46 1076 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 NDRG1Q92597 394 aaKnown RBP10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 FGF11Q92914 225 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 TTC17Q96AE7 1141 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 SKA1Q96BD8 255 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 TMEM176AQ96HP8 235 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 FAXDC2Q96IV6 333 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 DNAI2Q9GZS0 605 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 PABPC3Q9H361 631 aaKnown RBP10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 MTG2Q9H4K7 406 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 UPF2Q9HAU5 1272 aaKnown RBP10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 OLA1Q9NTK5 396 aaKnown RBP10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 FBXL12Q9NXK8 326 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 SERGEFQ9UGK8 458 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 ADAMTS1Q9UHI8 967 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 FRMD4BQ9Y2L6 1034 aa10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 MUC22E2RYF6 1773 aaPredicted RBP10.39□□□□□ -0.75
CALCOCO2-227ENST00000575560 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 FAM47DPA6NHR8 397 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 TULP2O00295 520 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 YKT6O15498 198 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 ABCB4P21439 1286 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 CD38P28907 300 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 CD70P32970 193 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 RXRGP48443 463 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 ENPEPQ07075 957 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 ILKQ13418 452 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 ARID5BQ14865 1188 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 KMT5BQ4FZB7 885 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 PIK3R6Q5UE93 754 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 SFMBT2Q5VUG0 894 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 CEP135Q66GS9 1140 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 KANSL1Q7Z3B3 1105 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 TTC39CQ8N584 583 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 OR2T34Q8NGX1 318 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 WFDC5Q8TCV5 224 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 RFFLQ8WZ73 363 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 BAP1Q92560 729 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 ZNF396Q96N95 335 aaPredicted RBP10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 IRX2Q9BZI1 471 aaPredicted RBP10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 ULBP1Q9BZM6 244 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 NEUROG2Q9H2A3 272 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 ERVMER34-1Q9H9K5 563 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 CISHQ9NSE2 258 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 SFMBT1Q9UHJ3 866 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 TRAF3IP3Q9Y228 551 aa10.38□□□□□ -0.75
CALCOCO2-227ENST00000575560 LRRC72A6NJI9 287 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 YJEFN3A6XGL0 299 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 E7ENQ6 273 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 TLR4O00206 839 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 CAPN9O14815 690 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 XPO1O14980 1071 aaKnown RBP10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 MID1O15344 667 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 BRINP1O60477 761 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 SIN3BO75182 1162 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 IGLV3-27P01718 113 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 TRIM49P0CI25 452 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 TRIM49CP0CI26 452 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 EPHA8P29322 1005 aaPredicted RBP10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 CCR5P51681 352 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 NXPH1P58417 271 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 TLE3Q04726 772 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 SFSWAPQ12872 951 aaKnown RBP10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 BNIP3Q12983 259 aa10.37□□□□□ -0.75
CALCOCO2-227ENST00000575560 CST6Q15828 149 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms