RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 TMPRSS3P57727 454 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 CLDN10P78369 228 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 TLE3Q04726 772 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 KCNH2Q12809 1159 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 TBC1D25Q3MII6 688 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 CNNM4Q6P4Q7 775 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 NCEH1Q6PIU2 408 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 FMNL3Q8IVF7 1028 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 CCDC117Q8IWD4 279 aaPredicted RBP12.44□□□□□ -0.42
CTNS-208ENST00000574218 SPACA3Q8IXA5 215 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 FAM217AQ8IXS0 508 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 OR2T34Q8NGX1 318 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 HEXIM2Q96MH2 286 aaKnown RBP12.44□□□□□ -0.42
CTNS-208ENST00000574218 TPX2Q9ULW0 747 aaKnown RBP12.44□□□□□ -0.42
CTNS-208ENST00000574218 FRMD4BQ9Y2L6 1034 aa12.44□□□□□ -0.42
CTNS-208ENST00000574218 HBS1LQ9Y450 684 aaKnown RBP12.44□□□□□ -0.42
CTNS-208ENST00000574218 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.43□□□□□ -0.42
CTNS-208ENST00000574218 A0A1W2PP55 124 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 MAGEC1O60732 1142 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 RNASEH2AO75792 299 aaKnown RBP12.43□□□□□ -0.42
CTNS-208ENST00000574218 LATS1O95835 1130 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 SLFN14P0C7P3 912 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 CKMT2P17540 419 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 GALCP54803 685 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 DLG4P78352 724 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 E2F1Q01094 437 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 TRIP4Q15650 581 aaPredicted RBP12.43□□□□□ -0.42
CTNS-208ENST00000574218 E2F4Q16254 413 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 ZNF394Q53GI3 561 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 PPP1R26Q5T8A7 1209 aaPredicted RBP12.43□□□□□ -0.42
CTNS-208ENST00000574218 CEP135Q66GS9 1140 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 SV2AQ7L0J3 742 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 CACTIN-AS1Q8N1I8 211 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 TTC39CQ8N584 583 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.43□□□□□ -0.42
CTNS-208ENST00000574218 TMC2Q8TDI7 906 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 NAF1Q96HR8 494 aaKnown RBP12.43□□□□□ -0.42
CTNS-208ENST00000574218 SERAC1Q96JX3 654 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 ORAI3Q9BRQ5 295 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 BACH2Q9BYV9 841 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 NIF3L1Q9GZT8 377 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 RSPH9Q9H1X1 276 aaPredicted RBP12.43□□□□□ -0.42
CTNS-208ENST00000574218 BLZF1Q9H2G9 400 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 CLMPQ9H6B4 373 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 ADAMTS1Q9UHI8 967 aa12.43□□□□□ -0.42
CTNS-208ENST00000574218 PVALEFA0A1B0GWK0 134 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 TLR4O00206 839 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 IKBKBO14920 756 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 SPTLC2O15270 562 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 MID1O15344 667 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 ASLP04424 464 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 C7P10643 843 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 CCR5P51681 352 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 TKTL1P51854 596 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 DAB2P98082 770 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 CST6Q15828 149 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 ADGRF1Q5T601 910 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 KDM7AQ6ZMT4 941 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 SND1Q7KZF4 910 aaKnown RBP eCLIP12.42□□□□□ -0.42
CTNS-208ENST00000574218 ADIPOR2Q86V24 386 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 PIGZQ86VD9 579 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 SLC9A9Q8IVB4 645 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 DHX40Q8IX18 779 aaKnown RBP12.42□□□□□ -0.42
CTNS-208ENST00000574218 LSMEM2Q8N112 164 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 TSC1Q92574 1164 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 WBP1Q96G27 269 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 IPO9Q96P70 1041 aaKnown RBP12.42□□□□□ -0.42
CTNS-208ENST00000574218 UBXN6Q9BZV1 441 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 ZSCAN16Q9H4T2 348 aaPredicted RBP12.42□□□□□ -0.42
CTNS-208ENST00000574218 ERVMER34-1Q9H9K5 563 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 LRRC4Q9HBW1 653 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 FZD4Q9ULV1 537 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 CEP83Q9Y592 693 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 DOCK9Q9BZ29 2069 aa12.42□□□□□ -0.42
CTNS-208ENST00000574218 TBL1XO60907 577 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 SIN3BO75182 1162 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 ZBED1O96006 694 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 NR3C1P04150 777 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 WNT1P04628 370 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 KRT13P13646 458 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 PSMD8P48556 350 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 NXPH1P58417 271 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 KCNC4Q03721 635 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 EHHADHQ08426 723 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 BNIP3Q12983 259 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 SHBQ15464 509 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 ARHGAP40Q5TG30 622 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 RNF219Q5W0B1 726 aaPredicted RBP12.41□□□□□ -0.42
CTNS-208ENST00000574218 PRPF39Q86UA1 669 aaKnown RBP12.41□□□□□ -0.42
CTNS-208ENST00000574218 ERICH1Q86X53 443 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 MMAAQ8IVH4 418 aaKnown RBP12.41□□□□□ -0.42
CTNS-208ENST00000574218 MFN1Q8IWA4 741 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 OR14C36Q8NHC7 312 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 RFFLQ8WZ73 363 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 ZNF578Q96N58 590 aaPredicted RBP12.41□□□□□ -0.42
CTNS-208ENST00000574218 ZNF396Q96N95 335 aaPredicted RBP12.41□□□□□ -0.42
CTNS-208ENST00000574218 DDX50Q9BQ39 737 aaKnown RBP12.41□□□□□ -0.42
CTNS-208ENST00000574218 IRX2Q9BZI1 471 aaPredicted RBP12.41□□□□□ -0.42
CTNS-208ENST00000574218 ULBP1Q9BZM6 244 aa12.41□□□□□ -0.42
CTNS-208ENST00000574218 NEUROG2Q9H2A3 272 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms