RNA–Protein interactions for RNA: ENST00000572694.1

ATP2A3-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-212ENST00000572694 TOP3BO95985 862 aaKnown RBP17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 C1QTNF9P0C862 333 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 HLA-EP13747 358 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 POLR2EP19388 210 aaKnown RBP17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 SGSHP51688 502 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 SIM1P81133 766 aaPredicted RBP17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 RFWD3Q6PCD5 774 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 ENOSF1Q7L5Y1 443 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 TMEM110Q86TL2 294 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 KDM1BQ8NB78 822 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 CYB5D2Q8WUJ1 264 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 ZNF606Q8WXB4 792 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 TRIM62Q9BVG3 475 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 MIS12Q9H081 205 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 INTS2Q9H0H0 1204 aaKnown RBP17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 LHX5Q9H2C1 402 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 OSGEPQ9NPF4 335 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 PRSS16Q9NQE7 514 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 CTNND2Q9UQB3 1225 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 MSRB2Q9Y3D2 182 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 NEUROG3Q9Y4Z2 214 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 KNL1Q8NG31 2342 aa17.71■□□□□ 0.43
ATP2A3-212ENST00000572694 SPAARA0A1B0GVQ0 90 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 CALCAP01258 141 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 ZNF883P0CG24 379 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 CD70P32970 193 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 STX17P56962 302 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 GRIK2Q13002 908 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 ARID5BQ14865 1188 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 NUMA1Q14980 2115 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 ZNF423Q2M1K9 1284 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 NADSYN1Q6IA69 706 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 IL27RAQ6UWB1 636 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 DBX2Q6ZNG2 339 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 HJURPQ8NCD3 748 aaPredicted RBP17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 OR2I1PQ8NGU4 316 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 WFDC5Q8TCV5 224 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 DQX1Q8TE96 717 aaKnown RBP17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 GATA6Q92908 595 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 UBE2TQ9NPD8 197 aaPredicted RBP17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 NAALADL1Q9UQQ1 740 aa17.7■□□□□ 0.42
ATP2A3-212ENST00000572694 MUC22E2RYF6 1773 aaPredicted RBP17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 TYW5A2RUC4 315 aaKnown RBP17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 BIN1O00499 593 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 SH3BP5O60239 455 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 GADD45BO75293 160 aaPredicted RBP17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 ASLP04424 464 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 SPINK2P20155 84 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 RPS14P62263 151 aaKnown RBP17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 FAM193AP78312 1265 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 EIF4EBP2Q13542 120 aaPredicted RBP17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 TRIP6Q15654 476 aaKnown RBP17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 MS4A13Q5J8X5 152 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 MFN1Q8IWA4 741 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 MYO19Q96H55 970 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 MED15Q96RN5 788 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 MIR1-1HGQ9H1L0 117 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 ST7Q9NRC1 585 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 EIF2B4Q9UI10 523 aaKnown RBP17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 SCML1Q9UN30 329 aa17.69■□□□□ 0.42
ATP2A3-212ENST00000572694 CABIN1Q9Y6J0 2220 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 DNTTP04053 509 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 ACSL1P33121 698 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 YWHAZP63104 245 aaKnown RBP17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 SYPL2Q5VXT5 272 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 DENND1BQ6P3S1 775 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 GLRX5Q86SX6 157 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 ZCCHC9Q8N567 271 aaKnown RBP17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 FAM149B1Q96BN6 582 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 BTBD1Q9H0C5 482 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 RSPH9Q9H1X1 276 aaPredicted RBP17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 THAP9Q9H5L6 903 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 POPDC2Q9HBU9 364 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 SGK2Q9HBY8 427 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 KIAA1468Q9P260 1216 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 RWDD2AQ9UIY3 292 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 INTS6Q9UL03 887 aaKnown RBP17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 PCDHB9Q9Y5E1 797 aa17.68■□□□□ 0.42
ATP2A3-212ENST00000572694 CAPN9O14815 690 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 PAPSS1O43252 624 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 HYAL3O43820 417 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 CBFA2T3O75081 653 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 LETM1O95202 739 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 CER1O95813 267 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 IGLV3-25P01717 112 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 KRT5P13647 590 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 ST8SIA6P61647 398 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 RPS24P62847 133 aaKnown RBP17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 BNC1Q01954 994 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 USP30Q70CQ3 517 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 RAB44Q7Z6P3 723 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 FAM124AQ86V42 546 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 CCDC117Q8IWD4 279 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 ZNF366Q8N895 744 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 MYEOVQ96EZ4 313 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 BTN2A3PQ96KV6 586 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 PRICKLE1Q96MT3 831 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 C6orf106Q9H6K1 298 aaPredicted RBP17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 GAREM1Q9H706 876 aa17.67■□□□□ 0.42
ATP2A3-212ENST00000572694 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms