RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 C11orf70Q9BRQ4 267 aa8.08□□□□□ -1.12
SMG6-211ENST00000572369 SELENOOQ9BVL4 669 aa8.08□□□□□ -1.12
SMG6-211ENST00000572369 EDEM3Q9BZQ6 932 aa8.08□□□□□ -1.12
SMG6-211ENST00000572369 XPO4Q9C0E2 1151 aaKnown RBP8.08□□□□□ -1.12
SMG6-211ENST00000572369 METTL5Q9NRN9 209 aaKnown RBP8.08□□□□□ -1.12
SMG6-211ENST00000572369 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMG6-211ENST00000572369 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMG6-211ENST00000572369 ADAM22Q9P0K1 906 aa8.08□□□□□ -1.12
SMG6-211ENST00000572369 MARK1Q9P0L2 795 aa8.08□□□□□ -1.12
SMG6-211ENST00000572369 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.08□□□□□ -1.12
SMG6-211ENST00000572369 GOLGA6L7A0A1B0GV03 622 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 TMCO5BA8MYB1 307 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 K7EQS6 105 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 IRAK2O43187 625 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 CACNG3O60359 315 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 FOXD2O60548 495 aaPredicted RBP8.07□□□□□ -1.12
SMG6-211ENST00000572369 TBL1XO60907 577 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 NTRK1P04629 796 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 CYP1A1P04798 512 aaPredicted RBP8.07□□□□□ -1.12
SMG6-211ENST00000572369 CALB1P05937 261 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 RETP07949 1114 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 DESP17661 470 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 CCR1P32246 355 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 SCNN1AP37088 669 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 MATKP42679 507 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 TNFRSF4P43489 277 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 SATB1Q01826 763 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 DEUP1Q05D60 604 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 NNTQ13423 1086 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 CLEC16AQ2KHT3 1053 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 GAB4Q2WGN9 574 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 ZC3H12AQ5D1E8 599 aaKnown RBP8.07□□□□□ -1.12
SMG6-211ENST00000572369 HEATR6Q6AI08 1181 aaKnown RBP8.07□□□□□ -1.12
SMG6-211ENST00000572369 LAIR1Q6GTX8 287 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 SDE2Q6IQ49 451 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 PSAPL1Q6NUJ1 521 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 PPP1R2P3Q6NXS1 205 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 RFWD3Q6PCD5 774 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 VPS36Q86VN1 386 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 CHSY1Q86X52 802 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 CCDC33Q8N5R6 958 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 ZNF513Q8N8E2 541 aaPredicted RBP8.07□□□□□ -1.12
SMG6-211ENST00000572369 TERB1Q8NA31 727 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 UCMAQ8WVF2 138 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 BAP1Q92560 729 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 FCRL2Q96LA5 508 aaPredicted RBP8.07□□□□□ -1.12
SMG6-211ENST00000572369 SLC2A13Q96QE2 648 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 NUCKS1Q9H1E3 243 aaKnown RBP8.07□□□□□ -1.12
SMG6-211ENST00000572369 HAUS4Q9H6D7 363 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 WDCPQ9H6R7 721 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 RRN3Q9NYV6 651 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 STIM2Q9P246 746 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 RAB23Q9ULC3 237 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 LUC7L2Q9Y383 392 aaKnown RBP8.07□□□□□ -1.12
SMG6-211ENST00000572369 PAXBP1Q9Y5B6 917 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 CACNA1IQ9P0X4 2223 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 DOPEY1Q5JWR5 2465 aa8.07□□□□□ -1.12
SMG6-211ENST00000572369 A0A1W2PQJ5 194 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 KCNU1A8MYU2 1149 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 CHURC1-FNTBB4DL54 471 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 F5H5T6 163 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 H0Y626 953 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 TRIM24O15164 1050 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 ZBTB24O43167 697 aaPredicted RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 C1QL1O75973 258 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 KLF8O95600 359 aaPredicted RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 TOP3BO95985 862 aaKnown RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 F9P00740 461 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 PENKP01210 267 aaPredicted RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 IGLV3-27P01718 113 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 KRT3P12035 628 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 SKILP12757 684 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 UNGP13051 313 aaPredicted RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 MMP8P22894 467 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 PITX1P78337 314 aaPredicted RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 MRPS21P82921 87 aaKnown RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 ATP11AP98196 1134 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 CENPCQ03188 943 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 MTA1Q13330 715 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 TRIM14Q14142 442 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 GAS6Q14393 721 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 DMC1Q14565 340 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 E2F5Q15329 346 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 LPAL2Q16609 132 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 CDO1Q16878 200 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 TSR1Q2NL82 804 aaKnown RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 FIGNQ5HY92 759 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 EOGTQ5NDL2 527 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 EMC10Q5UCC4 262 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 FYB2Q5VWT5 728 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 RAP1GAP2Q684P5 730 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 ACAD10Q6JQN1 1059 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 PKN3Q6P5Z2 889 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 DCUN1D2Q6PH85 259 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 TRMT11Q7Z4G4 463 aaKnown RBP8.06□□□□□ -1.12
SMG6-211ENST00000572369 IRF2BP2Q7Z5L9 587 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 ZNF605Q86T29 641 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 PROSER1Q86XN7 944 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 MFN1Q8IWA4 741 aa8.06□□□□□ -1.12
SMG6-211ENST00000572369 SFTPA1Q8IWL2 248 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms