RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 HDAC4P56524 1084 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 MRPS21P82921 87 aaKnown RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 CSTF1Q05048 431 aaKnown RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 MAPK8IP2Q13387 824 aaPredicted RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 AUHQ13825 339 aaKnown RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 TRIM14Q14142 442 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 CDO1Q16878 200 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 C5orf22Q49AR2 442 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 TDRD12Q587J7 1177 aaKnown RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 FSCBQ5H9T9 825 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 BRMS1LQ5PSV4 323 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 C10orf76Q5T2E6 689 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 GRAMD4Q6IC98 578 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 ALKBH5Q6P6C2 394 aaKnown RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 TMEM92Q6UXU6 159 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 TMC6Q7Z403 805 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 ADIPOR2Q86V24 386 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 FAM131BQ86XD5 332 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 ZNF683Q8IZ20 524 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 LGI2Q8N0V4 545 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 CCDC33Q8N5R6 958 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 ARFGAP1Q8N6T3 406 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 TC2NQ8N9U0 490 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 IL17RCQ8NAC3 791 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 FIBINQ8TAL6 211 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 NELL1Q92832 810 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 MRFAP1L1Q96HT8 127 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 C1orf74Q96LT6 269 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 ACOX2Q99424 681 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 DDX50Q9BQ39 737 aaKnown RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 SLC2A11Q9BYW1 496 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 IRX2Q9BZI1 471 aaPredicted RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 TRIM7Q9C029 511 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 PRMT8Q9NR22 394 aaPredicted RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 STIM2Q9P246 746 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 CNOT8Q9UFF9 292 aaKnown RBP9□□□□□ -0.97
TRAPPC1-203ENST00000571739 SLC12A6Q9UHW9 1150 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 FBXO4Q9UKT5 387 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 HCN4Q9Y3Q4 1203 aa9□□□□□ -0.97
TRAPPC1-203ENST00000571739 SSU72P8A0A1W2PR75 194 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 DRGXA6NNA5 263 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 WASH3PC4AMC7 463 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 AKR1B15C9JRZ8 316 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 SGK1O00141 431 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 CCP110O43303 1012 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 ATG13O75143 517 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 PAPSS2O95340 614 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 SDC4P31431 198 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 CD70P32970 193 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 RDXP35241 583 aaKnown RBP8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 CCR3P51677 355 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 ZNF143P52747 638 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 GALCP54803 685 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 GFPT1Q06210 699 aaPredicted RBP8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 DMWDQ09019 674 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 ZNF252P-AS1Q0IIN9 211 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 CCDC122Q5T0U0 273 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 EGFLAMQ63HQ2 1017 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 PPP1R2P3Q6NXS1 205 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 DNAJC24Q6P3W2 148 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 SYT13Q7L8C5 426 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 STRADAQ7RTN6 431 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 ALLCQ8N6M5 410 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 OR52K2Q8NGK3 314 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 MCEEQ96PE7 176 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 HAPLN3Q96S86 360 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 PHOX2BQ99453 314 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 IER2Q9BTL4 223 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 SIK2Q9H0K1 926 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 THAP2Q9H0W7 228 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 PARVAQ9NVD7 372 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 ELOVL2Q9NXB9 296 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 MYO1AQ9UBC5 1043 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 INTS6Q9UL03 887 aaKnown RBP8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 VANGL2Q9ULK5 521 aa8.99□□□□□ -0.97
TRAPPC1-203ENST00000571739 F5H5T6 163 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 FAM72CH0Y354 149 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 CNTN5O94779 1100 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 KLF8O95600 359 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 HOXA6P31267 233 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 PTPN5P54829 565 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 LMAN2Q12907 356 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 ENPP2Q13822 863 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 DMC1Q14565 340 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 CRY1Q16526 586 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 SLC18A3Q16572 532 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 ZNF528Q3MIS6 628 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 PREPLQ4J6C6 727 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 ALFQ53S48 1182 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 FAM72AQ5TYM5 149 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 FAM72DQ6L9T8 149 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 DCUN1D2Q6PH85 259 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 NUDT18Q6ZVK8 323 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 SND1Q7KZF4 910 aaKnown RBP eCLIP8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 CHST9Q7L1S5 443 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 CHSY1Q86X52 802 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 FAM72BQ86X60 149 aa8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 CIR1Q86X95 450 aaPredicted RBP8.98□□□□□ -0.97
TRAPPC1-203ENST00000571739 APCDD1Q8J025 514 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms