RNA–Protein interactions for RNA: ENST00000571457.1

CHMP6-202, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-202ENST00000571457 VPS37CA5D8V6 355 aaPredicted RBP11.82□□□□□ -0.52
CHMP6-202ENST00000571457 TLR4O00206 839 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 WNT1P04628 370 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 SLFN14P0C7P3 912 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 ACP1P24666 158 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 ASPAP45381 313 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 NXPH1P58417 271 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 ST8SIA6P61647 398 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 CEBPZQ03701 1054 aaKnown RBP11.82□□□□□ -0.52
CHMP6-202ENST00000571457 TRIP4Q15650 581 aaPredicted RBP11.82□□□□□ -0.52
CHMP6-202ENST00000571457 ZACNQ401N2 412 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 ADGRF1Q5T601 910 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 ARHGAP40Q5TG30 622 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 SFMBT2Q5VUG0 894 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 MBLAC2Q68D91 279 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 KIAA0907Q7Z7F0 614 aaPredicted RBP11.82□□□□□ -0.52
CHMP6-202ENST00000571457 FMNL3Q8IVF7 1028 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 DHX40Q8IX18 779 aaKnown RBP11.82□□□□□ -0.52
CHMP6-202ENST00000571457 PLEKHO2Q8TD55 490 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 ELMO3Q96BJ8 720 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 SERAC1Q96JX3 654 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 OMDQ99983 421 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 CYP3A43Q9HB55 503 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 OLA1Q9NTK5 396 aaKnown RBP11.82□□□□□ -0.52
CHMP6-202ENST00000571457 FZD4Q9ULV1 537 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 HBS1LQ9Y450 684 aaKnown RBP11.82□□□□□ -0.52
CHMP6-202ENST00000571457 PLXNA2O75051 1894 aa11.82□□□□□ -0.52
CHMP6-202ENST00000571457 A0A1W2PR77 199 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 IKBKBO14920 756 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 MAGEC1O60732 1142 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 RNASEH2AO75792 299 aaKnown RBP11.81□□□□□ -0.52
CHMP6-202ENST00000571457 WISP1O95388 367 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 LATS1O95835 1130 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 MT-CO3P00414 261 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 SLC8A3P57103 927 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 YWHAGP61981 247 aaKnown RBP eCLIP11.81□□□□□ -0.52
CHMP6-202ENST00000571457 INSM1Q01101 510 aaPredicted RBP11.81□□□□□ -0.52
CHMP6-202ENST00000571457 SLC39A14Q15043 492 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 CST6Q15828 149 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 KNOP1Q1ED39 458 aaKnown RBP11.81□□□□□ -0.52
CHMP6-202ENST00000571457 HS1BP3Q53T59 392 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 MPP7Q5T2T1 576 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 KDM7AQ6ZMT4 941 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 UNC13DQ70J99 1090 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 MED8Q96G25 268 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 NAF1Q96HR8 494 aaKnown RBP11.81□□□□□ -0.52
CHMP6-202ENST00000571457 HIC2Q96JB3 615 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 TWNKQ96RR1 684 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 IRX2Q9BZI1 471 aaPredicted RBP11.81□□□□□ -0.52
CHMP6-202ENST00000571457 UBXN6Q9BZV1 441 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 EBF2Q9HAK2 575 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 STOML2Q9UJZ1 356 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 TEX15Q9BXT5 2789 aa11.81□□□□□ -0.52
CHMP6-202ENST00000571457 AHCTF1Q8WYP5 2266 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 A0A1W2PP55 124 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 MID1O15344 667 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 SLC28A2O43868 658 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 DXOO77932 396 aaKnown RBP11.8□□□□□ -0.52
CHMP6-202ENST00000571457 ASLP04424 464 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 PIK3CAP42336 1068 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 ERVPABLB-1P60509 514 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 VAC14Q08AM6 782 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 OVGP1Q12889 678 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 BNIP3Q12983 259 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 LY6DQ14210 128 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 KCNJ12Q14500 433 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 ARID5BQ14865 1188 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 HNRNPA1L2Q32P51 320 aaKnown RBP11.8□□□□□ -0.52
CHMP6-202ENST00000571457 SPOPLQ6IQ16 392 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 SV2AQ7L0J3 742 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 IQCHQ86VS3 1027 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 MFSD2AQ8NA29 543 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 IQUBQ8NA54 791 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 KDM1BQ8NB78 822 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 TMC2Q8TDI7 906 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 RNF139Q8WU17 664 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 SNRNP27Q8WVK2 155 aaKnown RBP11.8□□□□□ -0.52
CHMP6-202ENST00000571457 KCNE4Q8WWG9 221 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 C7orf25Q9BPX7 421 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 DPH1Q9BZG8 443 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 NEUROG2Q9H2A3 272 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 CPNE5Q9HCH3 593 aa11.8□□□□□ -0.52
CHMP6-202ENST00000571457 USP9XQ93008 2570 aaPredicted RBP11.8□□□□□ -0.52
CHMP6-202ENST00000571457 SPTAN1Q13813 2472 aaKnown RBP11.8□□□□□ -0.52
CHMP6-202ENST00000571457 UNC79Q9P2D8 2635 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 IRAK2O43187 625 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 KLK10O43240 276 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 SIN3BO75182 1162 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 ZBED1O96006 694 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 ADH1BP00325 375 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 HLA-DRAP01903 254 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 NEFLP07196 543 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 GOT1P17174 413 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 CD58P19256 250 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 SLC8A1P32418 973 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 NUDT1P36639 197 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 LSSP48449 732 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 DAB2P98082 770 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 EHHADHQ08426 723 aa11.79□□□□□ -0.52
CHMP6-202ENST00000571457 ZNF211Q13398 564 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms