RNA–Protein interactions for RNA: ENST00000569971.5

UBR1-211, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 4

Gene UBR1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-211ENST00000569971 CPEB3Q8NE35 698 aaKnown RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 HAS1Q92839 578 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 R3HDM4Q96D70 268 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 NEUROD6Q96NK8 337 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 EIF3CQ99613 913 aaKnown RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 ADAM2Q99965 735 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 REEP2Q9BRK0 252 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 DPCDQ9BVM2 203 aaPredicted RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 PAIP1Q9H074 479 aaKnown RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 OSBPL5Q9H0X9 879 aaPredicted RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 RMI1Q9H9A7 625 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 JMJD4Q9H9V9 463 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 NOD2Q9HC29 1040 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 GLOD4Q9HC38 313 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 PREBQ9HCU5 417 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 RASSF1Q9NS23 344 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 PI4KBQ9UBF8 816 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 NKX1-2Q9UD57 310 aaPredicted RBP4.14□□□□□ -1.75
UBR1-211ENST00000569971 NFU1Q9UMS0 254 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 NEXMIFQ5QGS0 1516 aa4.14□□□□□ -1.75
UBR1-211ENST00000569971 NKTRP30414 1462 aaKnown RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 DYTNA2CJ06 578 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 UNC119BA6NIH7 251 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 SLC38A8A6NNN8 435 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 PLSCR1O15162 318 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 SLC16A3O15427 465 aaKnown RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 CDKL5O76039 1030 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 TFRCP02786 760 aaKnown RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 RHOP08100 348 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 HNRNPA1P09651 372 aaKnown RBP eCLIP4.13□□□□□ -1.75
UBR1-211ENST00000569971 C1SP09871 688 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ALADP13716 330 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 CPA1P15085 419 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 CD19P15391 556 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 DDX6P26196 483 aaKnown RBP eCLIP4.13□□□□□ -1.75
UBR1-211ENST00000569971 THBS4P35443 961 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 LIPAP38571 399 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 FAM3BP58499 235 aaPredicted RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 SEMA3BQ13214 749 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 BFSP2Q13515 415 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ANKRD1Q15327 319 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 SF3B3Q15393 1217 aaKnown RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 TBCCQ15814 346 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 BEAN1Q3B7T3 259 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 KRTAP15-1Q3LI76 137 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 AASDHQ4L235 1098 aaPredicted RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 ZNF484Q5JVG2 852 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 TREML2Q5T2D2 321 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 GPATCH4Q5T3I0 446 aaKnown RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 CCDC30Q5VVM6 783 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 FAM90A2PQ658T7 463 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ATG16L1Q676U5 607 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ANKRD40Q6AI12 368 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 CFAP161Q6P656 301 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 PCSK4Q6UW60 755 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 SYNE3Q6ZMZ3 975 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 RASGRP2Q7LDG7 609 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 DNAJC10Q8IXB1 793 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 LRRC71Q8N4P6 559 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 TCP11L2Q8N4U5 519 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 TSPYL6Q8N831 410 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 SLC25A43Q8WUT9 341 aaPredicted RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 SOCS4Q8WXH5 440 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ST8SIA4Q92187 359 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 STAMQ92783 540 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ZUFSPQ96AP4 578 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 PTCD3Q96EY7 689 aaKnown RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 WDYHV1Q96HA8 205 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 REXO5Q96IC2 774 aaKnown RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 PAAF1Q9BRP4 392 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 AGXT2Q9BYV1 514 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 PLEKHA2Q9HB19 425 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 BLOC1S4Q9NUP1 217 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 LIN7CQ9NUP9 197 aaKnown RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 DKK3Q9UBP4 350 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 FBXO2Q9UK22 296 aaPredicted RBP4.13□□□□□ -1.75
UBR1-211ENST00000569971 ARHGAP26Q9UNA1 814 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ZBTB1Q9Y2K1 713 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 PCDHA10Q9Y5I2 948 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 REREQ9P2R6 1566 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ZNF521Q96K83 1311 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 PCSK5Q92824 1860 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ANKRD36BQ8N2N9 1353 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 PLEKHH1Q9ULM0 1364 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 PREX1Q8TCU6 1659 aa4.13□□□□□ -1.75
UBR1-211ENST00000569971 ARHGEF28Q8N1W1 1705 aaKnown RBP4.12□□□□□ -1.75
UBR1-211ENST00000569971 SIGLEC1Q9BZZ2 1709 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 LOC105369274A0A096LPK9 316 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 LOC102723532A0A0G2JNH3 316 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 CCDC196A0A1B0GTZ2 297 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 VWA3AA6NCI4 1184 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 PSMD9O00233 223 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 KIAA0355O15063 1070 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 KLK10O43240 276 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 BAIAP3O94812 1187 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 SPDEFO95238 335 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 FESP07332 822 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 NR4A1P22736 598 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 BMPR1AP36894 532 aa4.12□□□□□ -1.75
UBR1-211ENST00000569971 CLCN2P51788 898 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms