RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 NCEH1Q6PIU2 408 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 FMNL3Q8IVF7 1028 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 EID2Q8N6I1 236 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 KIAA0895Q8NCT3 520 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 CCDC150Q8NCX0 1101 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 TAS1R2Q8TE23 839 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 TSC1Q92574 1164 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 FGF11Q92914 225 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 HEXIM2Q96MH2 286 aaKnown RBP12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 RSPH9Q9H1X1 276 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 KCTD10Q9H3F6 313 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 EXOC1Q9NV70 894 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 STOML2Q9UJZ1 356 aa12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 COL5A1P20908 1838 aaPredicted RBP12.3□□□□□ -0.44
GTF3C1-209ENST00000568569 LRRC72A6NJI9 287 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 MAPK13O15264 365 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 RNASEH1O60930 286 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 YEATS4O95619 227 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 ZBED1O96006 694 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 WNT1P04628 370 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 POLR2EP19388 210 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 CD38P28907 300 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 EPHA8P29322 1005 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 TLE3Q04726 772 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 STK4Q13043 487 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 MPP7Q5T2T1 576 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 PM20D1Q6GTS8 502 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 ZC3H3Q8IXZ2 948 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 TTC39CQ8N584 583 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 ZNF557Q8N988 423 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 OR2T34Q8NGX1 318 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 RNF139Q8WU17 664 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 TMEM176AQ96HP8 235 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 ZNF396Q96N95 335 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 AASDHPPTQ9NRN7 309 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 SERGEFQ9UGK8 458 aa12.29□□□□□ -0.44
GTF3C1-209ENST00000568569 A0A1W2PP55 124 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 J3QKU1 62 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 BRINP1O60477 761 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 CD70P32970 193 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 ACTN2P35609 894 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 GCLMP48507 274 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 SGSHP51688 502 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 ST8SIA6P61647 398 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 CFHR1Q03591 330 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 CST6Q15828 149 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 HNRNPA1L2Q32P51 320 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 SLC45A4Q5BKX6 768 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 ARHGAP17Q68EM7 881 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 INTS8Q75QN2 995 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 BHLHA9Q7RTU4 235 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 CEP57L1Q8IYX8 460 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 CACTIN-AS1Q8N1I8 211 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 OXR1Q8N573 874 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 ANKRD52Q8NB46 1076 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 INTS4Q96HW7 963 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 FAXDC2Q96IV6 333 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 IPO9Q96P70 1041 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 IRX2Q9BZI1 471 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 ULBP1Q9BZM6 244 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 NEUROG2Q9H2A3 272 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 EBF2Q9HAK2 575 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 FAM13BQ9NYF5 915 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 ADAMTS1Q9UHI8 967 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 FZD4Q9ULV1 537 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 TPX2Q9ULW0 747 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 CLCA2Q9UQC9 943 aa12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 MUC22E2RYF6 1773 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-209ENST00000568569 TMEM131Q92545 1883 aa12.27□□□□□ -0.44
GTF3C1-209ENST00000568569 SHROOM3Q8TF72 1996 aa12.27□□□□□ -0.44
GTF3C1-209ENST00000568569 TENM4Q6N022 2769 aa12.27□□□□□ -0.44
GTF3C1-209ENST00000568569 A0A1W2PR77 199 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 ERVH48-1M5A8F1 160 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 MID1O15344 667 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 CALUO43852 315 aaPredicted RBP12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 KLRC4O43908 158 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 SIN3BO75182 1162 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 RNASEH2AO75792 299 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 ASLP04424 464 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 TRIM49P0CI25 452 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 TRIM49CP0CI26 452 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 CKMT2P17540 419 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 RXRGP48443 463 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 CCR5P51681 352 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 NXPH1P58417 271 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 CXADRP78310 365 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 PPP3CAQ08209 521 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 KCNJ12Q14500 433 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 TBC1D25Q3MII6 688 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 SFMBT2Q5VUG0 894 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 ERICH1Q86X53 443 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 MFN1Q8IWA4 741 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 SPACA3Q8IXA5 215 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 GRAMD1CQ8IYS0 662 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 SLC4A11Q8NBS3 891 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 WFDC5Q8TCV5 224 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 RFFLQ8WZ73 363 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 NDRG1Q92597 394 aaKnown RBP12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 MYO19Q96H55 970 aa12.27□□□□□ -0.45
GTF3C1-209ENST00000568569 SERAC1Q96JX3 654 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms