RNA–Protein interactions for RNA: ENST00000568169.5

TCF4-238, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-238	ENST00000568169	SUN2	Q9UH99	717 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	SERTAD1	Q9UHV2	236 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	GGA2	Q9UJY4	613 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169	LAMA5	O15230	3695 aa		11.87	□□□□□ -0.51
TCF4-238	ENST00000568169		A0A1W2PPC4	97 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	C10orf142	B7Z368	130 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	ENC1	O14682	589 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	ATXN7	O15265	892 aa	Predicted RBP	11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	ACTN4	O43707	911 aa	Known RBP	11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	CALU	O43852	315 aa	Predicted RBP	11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	C1QL1	O75973	258 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	ATP5B	P06576	529 aa	Known RBP	11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	JUP	P14923	745 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	EIF2S3	P41091	472 aa	Known RBP	11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	GALC	P54803	685 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	C21orf59	P57076	290 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	SHB	Q15464	509 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	NFIL3	Q16649	462 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	MPP7	Q5T2T1	576 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	TTC39C	Q8N584	583 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	CCDC150	Q8NCX0	1101 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	WFDC5	Q8TCV5	224 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	SPOCK2	Q92563	424 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	PAGE5	Q96GU1	130 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	TMEM176A	Q96HP8	235 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	ELF4	Q99607	663 aa	Predicted RBP	11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	PABPC3	Q9H361	631 aa	Known RBP	11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	TMEM8A	Q9HCN3	771 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	CISH	Q9NSE2	258 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	SCML1	Q9UN30	329 aa		11.86	□□□□□ -0.51
TCF4-238	ENST00000568169	BPTF	Q12830	3046 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	CBX4	O00257	560 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	TULP2	O00295	520 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	TLX3	O43711	291 aa	Predicted RBP	11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	LDOC1	O95751	146 aa	Predicted RBP	11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	WNT1	P04628	370 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	KRT13	P13646	458 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	POLR2E	P19388	210 aa	Known RBP	11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	NR2F2	P24468	414 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	GTF2H1	P32780	548 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	CD70	P32970	193 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	HNF1B	P35680	557 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	ME1	P48163	572 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	SGSH	P51688	502 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	CLDN6	P56747	220 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	SLC8A3	P57103	927 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	RTP5	Q14D33	572 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	PRAMEF14	Q5SWL7	426 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	C6orf118	Q5T5N4	469 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	BSPRY	Q5W0U4	402 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	LSM14A	Q8ND56	463 aa	Known RBP	11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	SAP25	Q8TEE9	199 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	RNF139	Q8WU17	664 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	TSC1	Q92574	1164 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	SEMA4D	Q92854	862 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	SKA1	Q96BD8	255 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	MYO19	Q96H55	970 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	CNDP2	Q96KP4	475 aa	Known RBP	11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	LMLN	Q96KR4	655 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	SLC6A18	Q96N87	628 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	IRX2	Q9BZI1	471 aa	Predicted RBP	11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	NRSN2	Q9GZP1	204 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	MTG2	Q9H4K7	406 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	EBF2	Q9HAK2	575 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	FBXL12	Q9NXK8	326 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	SFMBT1	Q9UHJ3	866 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	NCKAP1	Q9Y2A7	1128 aa		11.85	□□□□□ -0.51
TCF4-238	ENST00000568169	YJEFN3	A6XGL0	299 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169		E7ENQ6	273 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	XPO1	O14980	1071 aa	Known RBP	11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	RFPL3	O75679	317 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	ITGAV	P06756	1048 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	ACADVL	P49748	655 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	SEMG2	Q02383	582 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	DNAJC3	Q13217	504 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	KCNJ12	Q14500	433 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	ARID5B	Q14865	1188 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	PIK3R6	Q5UE93	754 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	KRT39	Q6A163	491 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	MSANTD2	Q6P1R3	559 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	FBXL19	Q6PCT2	694 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	NCEH1	Q6PIU2	408 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	LRRC69	Q6ZNQ3	347 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	FAM186B	Q8IYM0	893 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	SNIP1	Q8TAD8	396 aa	Known RBP	11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	GANC	Q8TET4	914 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	EDEM1	Q92611	657 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	TTC17	Q96AE7	1141 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	NEUROG2	Q9H2A3	272 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	MMRN2	Q9H8L6	949 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	LRRC4	Q9HBW1	653 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	SERGEF	Q9UGK8	458 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	ADAMTS1	Q9UHI8	967 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	RAI2	Q9Y5P3	530 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169	ZNF462	Q96JM2	2506 aa		11.84	□□□□□ -0.51
TCF4-238	ENST00000568169		A0A1W2PR77	199 aa		11.83	□□□□□ -0.52
TCF4-238	ENST00000568169	FAM47DP	A6NHR8	397 aa		11.83	□□□□□ -0.52
TCF4-238	ENST00000568169		K7ELQ4	463 aa	Predicted RBP	11.83	□□□□□ -0.52
TCF4-238	ENST00000568169	WNT9A	O14904	365 aa		11.83	□□□□□ -0.52
TCF4-238	ENST00000568169	YKT6	O15498	198 aa		11.83	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms