RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 GPD1P21695 349 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 SDC4P31431 198 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 RDXP35241 583 aaKnown RBP12.85□□□□□ -0.35
RNF40-211ENST00000567365 RPS24P62847 133 aaKnown RBP12.85□□□□□ -0.35
RNF40-211ENST00000567365 KDSRQ06136 332 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 SLC18A3Q16572 532 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 RAP1GAP2Q684P5 730 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 TMEM215Q68D42 235 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 GRAMD4Q6IC98 578 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 ALKBH5Q6P6C2 394 aaKnown RBP12.85□□□□□ -0.35
RNF40-211ENST00000567365 C14orf80Q86SX3 495 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 SPEM1Q8N4L4 309 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 ARFGAP1Q8N6T3 406 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 HJURPQ8NCD3 748 aaPredicted RBP12.85□□□□□ -0.35
RNF40-211ENST00000567365 FNIP1Q8TF40 1166 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 DDI1Q8WTU0 396 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 BHMTQ93088 406 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 C1orf74Q96LT6 269 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 MCEEQ96PE7 176 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 DDX50Q9BQ39 737 aaKnown RBP12.85□□□□□ -0.35
RNF40-211ENST00000567365 CNPY3Q9BT09 278 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 TRIM7Q9C029 511 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 TKTL2Q9H0I9 626 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 WDCPQ9H6R7 721 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 TMPRSS4Q9NRS4 437 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 CNOT8Q9UFF9 292 aaKnown RBP12.85□□□□□ -0.35
RNF40-211ENST00000567365 HS3ST4Q9Y661 456 aa12.85□□□□□ -0.35
RNF40-211ENST00000567365 FRYLO94915 3013 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 IGLV3-10A0A075B6K4 115 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 SYNJ2BP-COX16A0A087WUM0 186 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 H0Y858 1186 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 CCP110O43303 1012 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 CYBBP04839 570 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 APODP05090 189 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 CYP1A2P05177 515 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 ABCB4P21439 1286 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 CDC25BP30305 580 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 HLA-FP30511 346 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 DGKGP49619 791 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 IRAK1P51617 712 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 MRPS21P82921 87 aaKnown RBP12.84□□□□□ -0.35
RNF40-211ENST00000567365 ATP11AP98196 1134 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 NRG1Q02297 640 aaPredicted RBP12.84□□□□□ -0.35
RNF40-211ENST00000567365 GFPT1Q06210 699 aaPredicted RBP12.84□□□□□ -0.35
RNF40-211ENST00000567365 AUHQ13825 339 aaKnown RBP12.84□□□□□ -0.35
RNF40-211ENST00000567365 GEN1Q17RS7 908 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 EMC10Q5UCC4 262 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 MANEALQ5VSG8 457 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 FBXL22Q6P050 247 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 CHSY1Q86X52 802 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 FAM131BQ86XD5 332 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 KCNV2Q8TDN2 545 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 FAM172AQ8WUF8 416 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 IGSF8Q969P0 613 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 ZNF653Q96CK0 615 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 ARHGEF26Q96DR7 871 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 TRIM11Q96F44 468 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 HAPLN3Q96S86 360 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 PRRX2Q99811 253 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 COX16Q9P0S2 106 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 ZNF212Q9UDV6 495 aa12.84□□□□□ -0.35
RNF40-211ENST00000567365 ANKRD62A6NC57 917 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 DRGXA6NNA5 263 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 K7ESF4 209 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 GFRA3O60609 400 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 TBL1XO60907 577 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 ADAM23O75077 832 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 TPM1P09493 284 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 HOXC13P31276 330 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 ADRA1BP35368 520 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 GALCP54803 685 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 SATB1Q01826 763 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 SCAPQ12770 1279 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 ENPP2Q13822 863 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 ANGPT1Q15389 498 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 CDO1Q16878 200 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 PREPLQ4J6C6 727 aaPredicted RBP12.83□□□□□ -0.36
RNF40-211ENST00000567365 CCDC122Q5T0U0 273 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 CYP4V2Q6ZWL3 525 aaPredicted RBP12.83□□□□□ -0.36
RNF40-211ENST00000567365 LGI2Q8N0V4 545 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 CFAP52Q8N1V2 620 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 IL17RCQ8NAC3 791 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 FIBINQ8TAL6 211 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.83□□□□□ -0.36
RNF40-211ENST00000567365 THAP2Q9H0W7 228 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 NHEJ1Q9H9Q4 299 aaPredicted RBP12.83□□□□□ -0.36
RNF40-211ENST00000567365 CD248Q9HCU0 757 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 SLC12A6Q9UHW9 1150 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 FBXO4Q9UKT5 387 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 INTS6Q9UL03 887 aaKnown RBP12.83□□□□□ -0.36
RNF40-211ENST00000567365 NEU3Q9UQ49 428 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 PAXBP1Q9Y5B6 917 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 SNX10Q9Y5X0 201 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 CHD5Q8TDI0 1954 aa12.83□□□□□ -0.36
RNF40-211ENST00000567365 TBC1D3BA6NDS4 549 aa12.82□□□□□ -0.36
RNF40-211ENST00000567365 F5H5T6 163 aa12.82□□□□□ -0.36
RNF40-211ENST00000567365 LUC7L3O95232 432 aaKnown RBP12.82□□□□□ -0.36
RNF40-211ENST00000567365 LCA5LO95447 670 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms