RNA–Protein interactions for RNA: ENST00000566136.1

UBFD1-205, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 2,485 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-205ENST00000566136 CDC42EP5Q6NZY7 148 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 CLEC2AQ6UVW9 174 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 FAM83AQ86UY5 434 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 IRF2BP1Q8IU81 584 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 TDRD5Q8NAT2 981 aaKnown RBP11.08□□□□□ -0.64
UBFD1-205ENST00000566136 DEPDC1BQ8WUY9 529 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 RIOX1Q9H6W3 641 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 KCND3Q9UK17 655 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 AP4E1Q9UPM8 1137 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 PCDHGA5Q9Y5G8 931 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 PCDHGA1Q9Y5H4 931 aa11.08□□□□□ -0.64
UBFD1-205ENST00000566136 A0A1W2PRV1 198 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 LAD1O00515 517 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 TSC22D2O75157 780 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 GCNT3O95395 438 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 TDP2O95551 362 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 SRGAP2BP0DMP2 458 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 CPT2P23786 658 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 CST5P28325 142 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 SHMT1P34896 483 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 NOVP48745 357 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 AMPD2Q01433 879 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 POU4F2Q12837 409 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 RPA4Q13156 261 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 UBE2SQ16763 222 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 GLE1Q53GS7 698 aaKnown RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 PRICKLE2Q7Z3G6 844 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 LAPTM4BQ86VI4 370 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 CXorf67Q86X51 503 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 GOLGA6L1Q8N7Z2 621 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ETNPPLQ8TBG4 499 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 SP7Q8TDD2 431 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 METTL21AQ8WXB1 218 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 UHRF1Q96T88 793 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 INSM2Q96T92 566 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 APOL6Q9BWW8 343 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 CARD6Q9BX69 1037 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 FUT8Q9BYC5 575 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ABHD16BQ9H3Z7 469 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 PCIF1Q9H4Z3 704 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 CD93Q9NPY3 652 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 RGS13O14921 159 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 SLC37A4O43826 429 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 GP5P40197 560 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ZNF41P51814 821 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ADCY7P51828 1080 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ASIC1P78348 528 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 MAMLD1Q13495 774 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 HABP2Q14520 560 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 IRF3Q14653 427 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 GPR68Q15743 365 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 LRCH2Q5VUJ6 765 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ZYG11AQ6WRX3 759 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 KCTD1Q719H9 257 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 FAM160B2Q86V87 743 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ANKRD20A12PQ8NF67 263 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ZNF397Q8NF99 534 aaPredicted RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ZFAND2BQ8WV99 257 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 MMTAG2Q9BU76 263 aaKnown RBP11.07□□□□□ -0.64
UBFD1-205ENST00000566136 GLT8D2Q9H1C3 349 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 ZFAND3Q9H8U3 227 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 HIF3AQ9Y2N7 669 aa11.07□□□□□ -0.64
UBFD1-205ENST00000566136 PLIN4Q96Q06 1357 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 IGKV6D-41A0A0C4DH26 115 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 A0A0G2JPF8 293 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 HNRNPCL3B7ZW38 293 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 ZNF862O60290 1169 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 PPP1R11O60927 126 aaPredicted RBP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 TTLL1O95922 423 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 HNRNPCL4P0DMR1 293 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 FCER1AP12319 257 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 CA8P35219 290 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 PTGIRP43119 386 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 MANFP55145 182 aaKnown RBP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 TCP10Q12799 353 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 DUSP4Q13115 394 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 RCN2Q14257 317 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 FAM47CQ5HY64 1035 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 GNASQ5JWF2 1037 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 NOL9Q5SY16 702 aaKnown RBP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 MBLAC2Q68D91 279 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 WDR93Q6P2C0 686 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 IQCDQ96DY2 449 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 RUBCNLQ9H714 662 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 RNF112Q9ULX5 631 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 CASP8AP2Q9UKL3 1982 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 TRIM43BA6NCK2 446 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 PHGDHO43175 533 aaKnown RBP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 EDIL3O43854 480 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 PRAMEF12O95522 483 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 RPA1P27694 616 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 CAMLGP49069 296 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 ERVK-24P63145 666 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 SPAG1Q07617 926 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 CALCRLQ16602 461 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 ASPRV1Q53RT3 343 aa11.06□□□□□ -0.64
UBFD1-205ENST00000566136 APOBEC3HQ6NTF7 200 aaKnown RBP11.06□□□□□ -0.64
UBFD1-205ENST00000566136 ARMC8Q8IUR7 673 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms