RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 NR4A2P43354 598 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 KRT6CP48668 564 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 HERC3Q15034 1050 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 RNASEH2BQ5TBB1 312 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 ALG1LQ6GMV1 187 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CCDC137Q6PK04 289 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 SPRED1Q7Z699 444 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 BRSK2Q8IWQ3 736 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CELF1Q92879 486 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 CEP295NLQ96MC4 621 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CCDC177Q9NQR7 707 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 TAS2R14Q9NYV8 317 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GPRC5DQ9NZD1 345 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 RABGEF1Q9UJ41 708 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 H3BNH8 94 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NUAK1O60285 661 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SLITRK3O94933 977 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ERBB2P04626 1255 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 OR52Z1P0C646 297 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GAP43P17677 238 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PTGS2P35354 604 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CLK3P49761 638 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 EPHB1P54762 984 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CHRNEQ04844 493 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NCOA4Q13772 614 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZNF846Q147U1 533 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CYTH1Q15438 398 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 INAVAQ3KP66 663 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CCNJQ5T5M9 372 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 C6orf183Q5T699 404 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TEDDM1Q5T9Z0 273 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 C16orf46Q6P387 395 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 AVL9Q8NBF6 648 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NEDD1Q8NHV4 660 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GRK7Q8WTQ7 553 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 DUS3LQ96G46 650 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 GCNAQ96QF7 691 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ALPK1Q96QP1 1244 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PNPLA3Q9NST1 481 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ANKMY1Q9P2S6 941 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GNEQ9Y223 722 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 VWA7Q9Y334 891 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ROBO3Q96MS0 1386 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 C1QAP02745 245 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 HLA-DPA1P20036 260 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 INPP1P49441 399 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 FXR2P51116 673 aaKnown RBP eCLIP2.99□□□□□ -1.931e-6■■■■□ 20.1
CHD9-218ENST00000566029 KPNA1P52294 538 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 CEACAM7Q14002 265 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 EFTUD2Q15029 972 aaKnown RBP eCLIP2.99□□□□□ -1.934e-7■■■■□ 24.8
CHD9-218ENST00000566029 C2orf76Q3KRA6 126 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 LRIF1Q5T3J3 769 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ANKS6Q68DC2 871 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CCDC62Q6P9F0 684 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 C10orf53Q8N6V4 93 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PACRGLQ8N7B6 248 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 UBL4BQ8N7F7 174 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ANGPTL6Q8NI99 470 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZNF486Q96H40 463 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 BTN2A3PQ96KV6 586 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CLSTN3Q9BQT9 956 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TEX13BQ9BXU2 312 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 AS3MTQ9HBK9 375 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 MOV10Q9HCE1 1003 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 TBKBP1A7MCY6 615 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PDXKO00764 312 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 EDIL3O43854 480 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ACSL3O95573 720 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 GUCA1CO95843 209 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SERPINB2P05120 415 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ABCB1P08183 1280 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 MYL3P08590 195 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 COX4I1P13073 169 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PROZP22891 400 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 KPNA2P52292 529 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 TRIM25Q14258 630 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 GRAMD1BQ3KR37 738 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TFDP3Q5H9I0 405 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 FAM117BQ6P1L5 589 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SCIMPQ6UWF3 145 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 RFPL4BQ6ZWI9 263 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 DPP9Q86TI2 863 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SLC4A11Q8NBS3 891 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NEDD4LQ96PU5 975 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PRPF18Q99633 342 aaKnown RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 TMEM121Q9BTD3 319 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NANOGQ9H9S0 305 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 SLC38A10Q9HBR0 1119 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 AVENQ9NQS1 362 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 OLAHQ9NV23 265 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 PARVAQ9NVD7 372 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 DMAC2Q9NW81 257 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 NCKIPSDQ9NZQ3 722 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CDH22Q9UJ99 828 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 TRPC5Q9UL62 973 aaPredicted RBP2.99□□□□□ -1.93
CHD9-218ENST00000566029 MYRFQ9Y2G1 1151 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 ZBTB1Q9Y2K1 713 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 IFT52Q9Y366 437 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 RIMBP2O15034 1052 aa2.99□□□□□ -1.93
CHD9-218ENST00000566029 CLDN3O15551 220 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms