RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 ILKQ13418 452 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 RESP18Q5W5W9 173 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 MBLAC2Q68D91 279 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 ZNF776Q68DI1 518 aaPredicted RBP13.3□□□□□ -0.28
RNF40-208ENST00000565995 LAYNQ6UX15 382 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 RSRC2Q7L4I2 434 aaKnown RBP13.3□□□□□ -0.28
RNF40-208ENST00000565995 FMNL3Q8IVF7 1028 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 SCML4Q8N228 414 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 ANKRD52Q8NB46 1076 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 KDM1BQ8NB78 822 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 SLC4A11Q8NBS3 891 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 TAS1R2Q8TE23 839 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 TTC17Q96AE7 1141 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 HEXIM2Q96MH2 286 aaKnown RBP13.3□□□□□ -0.28
RNF40-208ENST00000565995 DCBLD2Q96PD2 775 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 ARID3AQ99856 593 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 PABPC3Q9H361 631 aaKnown RBP13.3□□□□□ -0.28
RNF40-208ENST00000565995 ERVMER34-1Q9H9K5 563 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 EBF2Q9HAK2 575 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 ABCB8Q9NUT2 735 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 CHMP5Q9NZZ3 219 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 GGA2Q9UJY4 613 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 FRMD4BQ9Y2L6 1034 aa13.3□□□□□ -0.28
RNF40-208ENST00000565995 NAV2Q8IVL1 2488 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 TEX51A0A1B0GUA7 166 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 A0A1W2PR77 199 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 KIF20AO95235 890 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 WNT1P04628 370 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 PABPC1P11940 636 aaKnown RBP13.29□□□□□ -0.28
RNF40-208ENST00000565995 CD58P19256 250 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 AFMP43652 599 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 RXRGP48443 463 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 ACADVLP49748 655 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 TKTL1P51854 596 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 RAD23BP54727 409 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 C21orf59P57076 290 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 SFSWAPQ12872 951 aaKnown RBP13.29□□□□□ -0.28
RNF40-208ENST00000565995 TARDBPQ13148 414 aaKnown RBP eCLIP13.29□□□□□ -0.28
RNF40-208ENST00000565995 LRRC69Q6ZNQ3 347 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 INTS8Q75QN2 995 aaKnown RBP13.29□□□□□ -0.28
RNF40-208ENST00000565995 ADAT2Q7Z6V5 191 aaKnown RBP13.29□□□□□ -0.28
RNF40-208ENST00000565995 ZNF366Q8N895 744 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 ZNF557Q8N988 423 aaPredicted RBP13.29□□□□□ -0.28
RNF40-208ENST00000565995 RFFLQ8WZ73 363 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 AZIN2Q96A70 460 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 SKA1Q96BD8 255 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 TMEM176AQ96HP8 235 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 CNDP2Q96KP4 475 aaKnown RBP13.29□□□□□ -0.28
RNF40-208ENST00000565995 FZD4Q9ULV1 537 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 TPX2Q9ULW0 747 aaKnown RBP13.29□□□□□ -0.28
RNF40-208ENST00000565995 NCKAP1Q9Y2A7 1128 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 RAI2Q9Y5P3 530 aa13.29□□□□□ -0.28
RNF40-208ENST00000565995 RRP8O43159 456 aaKnown RBP13.28□□□□□ -0.28
RNF40-208ENST00000565995 IGLV3-27P01718 113 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 PDIA4P13667 645 aaKnown RBP13.28□□□□□ -0.28
RNF40-208ENST00000565995 PLA2G2AP14555 144 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 POLR2EP19388 210 aaKnown RBP13.28□□□□□ -0.28
RNF40-208ENST00000565995 CD38P28907 300 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 GTF2H1P32780 548 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 CCR5P51681 352 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 IL9RQ01113 521 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 PKP1Q13835 747 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 KCNJ12Q14500 433 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 KMT5BQ4FZB7 885 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 PIK3R6Q5UE93 754 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 SFMBT2Q5VUG0 894 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 KANSL1Q7Z3B3 1105 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 GATAD2AQ86YP4 633 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 ZNF843Q8N446 348 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 WFDC5Q8TCV5 224 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 ABCC13Q9NSE7 274 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 FBXL12Q9NXK8 326 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 FAM13BQ9NYF5 915 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 PCDHA7Q9UN72 937 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 TRPM6Q9BX84 2022 aa13.28□□□□□ -0.28
RNF40-208ENST00000565995 KIF26BQ2KJY2 2108 aa13.27□□□□□ -0.28
RNF40-208ENST00000565995 TARSL2A2RTX5 802 aaKnown RBP13.27□□□□□ -0.29
RNF40-208ENST00000565995 CAPN8A6NHC0 703 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 XPO1O14980 1071 aaKnown RBP13.27□□□□□ -0.29
RNF40-208ENST00000565995 IRAK2O43187 625 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 ACTN4O43707 911 aaKnown RBP13.27□□□□□ -0.29
RNF40-208ENST00000565995 CALUO43852 315 aaPredicted RBP13.27□□□□□ -0.29
RNF40-208ENST00000565995 MYL1P05976 194 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 ITGAVP06756 1048 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 ZSCAN22P10073 491 aaPredicted RBP13.27□□□□□ -0.29
RNF40-208ENST00000565995 CD70P32970 193 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 GCLMP48507 274 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 SGSHP51688 502 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 SLC8A3P57103 927 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 DNAJC3Q13217 504 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 HNRNPA1L2Q32P51 320 aaKnown RBP13.27□□□□□ -0.29
RNF40-208ENST00000565995 ZNF394Q53GI3 561 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 CCDC157Q569K6 752 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 BSPRYQ5W0U4 402 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 CEP135Q66GS9 1140 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 MSANTD2Q6P1R3 559 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 PCSK4Q6UW60 755 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 GRAMD1CQ8IYS0 662 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 CCDC150Q8NCX0 1101 aa13.27□□□□□ -0.29
RNF40-208ENST00000565995 OR2T34Q8NGX1 318 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms