RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	CTGF	P29279	349 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	FDFT1	P37268	417 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	ACTR3	P61158	418 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	SARNP	P82979	210 aa	Known RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	HIC1	Q14526	733 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	LBR	Q14739	615 aa	Known RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	DCAF4L1	Q3SXM0	396 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	RABGAP1L	Q5R372	815 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	IRGC	Q6NXR0	463 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	ALKAL1	Q6UXT8	129 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	STRADA	Q7RTN6	431 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	PLEKHH3	Q7Z736	793 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	RASAL3	Q86YV0	1011 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	COLGALT1	Q8NBJ5	622 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	PIWIL2	Q8TC59	973 aa	Known RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	EMID1	Q96A84	441 aa	Predicted RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	RILP	Q96NA2	401 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	PARK7	Q99497	189 aa	Known RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	EIF2A	Q9BY44	585 aa	Known RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	TUT1	Q9H6E5	874 aa	Known RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	XPNPEP3	Q9NQH7	507 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	PIH1D1	Q9NWS0	290 aa	Known RBP	13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	HES2	Q9Y543	173 aa		13.54	□□□□□ -0.24
SCAPER-215	ENST00000565507	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	MFSD11	O43934	449 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	CCNH	P51946	323 aa	Predicted RBP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	BCAT1	P54687	386 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	RPL10A	P62906	217 aa	Known RBP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	GRIK3	Q13003	919 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	PCLAF	Q15004	111 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	KIZ	Q2M2Z5	673 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	GLRA4	Q5JXX5	417 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	C9orf57	Q5W0N0	161 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	RIPOR1	Q6ZS17	1223 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	ZNF410	Q86VK4	478 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	HACE1	Q8IYU2	909 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	NETO2	Q8NC67	525 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	SIKE1	Q9BRV8	207 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	EIF2B3	Q9NR50	452 aa	Known RBP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	FZD10	Q9ULW2	581 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	SORCS3	Q9UPU3	1222 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	CCDC189	A1A4V9	331 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	DYNC1LI2	O43237	492 aa	Predicted RBP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	GLRA3	O75311	464 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	PDGFRB	P09619	1106 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	CYP2B6	P20813	491 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	MGAT1	P26572	445 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	ARRB2	P32121	409 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	GRIK4	Q16099	956 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	FAM110C	Q1W6H9	321 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	TRMT5	Q32P41	509 aa	Known RBP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	DNAL1	Q4LDG9	190 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	CASC4	Q6P4E1	433 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	MAVS	Q7Z434	540 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	FAM131B	Q86XD5	332 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	MYLK4	Q86YV6	388 aa	Predicted RBP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	P2RY11	Q96G91	374 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	THTPA	Q9BU02	230 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	APOL6	Q9BWW8	343 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	ADAMTS10	Q9H324	1103 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	SETD4	Q9NVD3	440 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	DNAJC16	Q9Y2G8	782 aa		13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	MYO18A	Q92614	2054 aa	Known RBP	13.53	□□□□□ -0.24
SCAPER-215	ENST00000565507	RBM47	A0AV96	593 aa	Known RBP	13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	SPTLC1	O15269	473 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	ITGA2B	P08514	1039 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	SKI	P12755	728 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	PGAM1	P18669	254 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	SLC1A6	P48664	564 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	SESN2	P58004	480 aa	Predicted RBP	13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	ZNF618	Q5T7W0	954 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	OTUD1	Q5VV17	481 aa	Predicted RBP	13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	OLFML2B	Q68BL8	750 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	WDR75	Q8IWA0	830 aa	Known RBP	13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	BEST2	Q8NFU1	509 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	SORT1	Q99523	831 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507	TMPRSS4	Q9NRS4	437 aa		13.52	□□□□□ -0.24
SCAPER-215	ENST00000565507		A0A088AWK7	358 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	RNF103	O00237	685 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	C6orf222	P0C671	652 aa	Predicted RBP	13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	ARL4A	P40617	200 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	MATK	P42679	507 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	PITX1	P78337	314 aa	Predicted RBP	13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	TAF1C	Q15572	869 aa	Predicted RBP	13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	TMEM154	Q6P9G4	183 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	SLC27A1	Q6PCB7	646 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	CCNJL	Q8IV13	435 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	OR6J1	Q8NGC5	347 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	SHKBP1	Q8TBC3	707 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	CDKL2	Q92772	493 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	HSFY1	Q96LI6	401 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	CEP41	Q9BYV8	373 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	STN1	Q9H668	368 aa	Known RBP	13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	CDHR5	Q9HBB8	845 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	VTA1	Q9NP79	307 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	DCDC2	Q9UHG0	476 aa		13.52	□□□□□ -0.25
SCAPER-215	ENST00000565507	PIR	O00625	290 aa		13.51	□□□□□ -0.25
SCAPER-215	ENST00000565507	ZNF195	O14628	629 aa		13.51	□□□□□ -0.25

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