RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 ACADMP11310 421 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 GNSP15586 552 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 POLR2EP19388 210 aaKnown RBP20.62■□□□□ 0.89
CLN6-206ENST00000565471 CD70P32970 193 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 USP8P40818 1118 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 ATXN3P54252 364 aaPredicted RBP20.62■□□□□ 0.89
CLN6-206ENST00000565471 APBA1Q02410 837 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 MAN2A1Q16706 1144 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 MS4A13Q5J8X5 152 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 RGL4Q8IZJ4 473 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 ADAM32Q8TC27 787 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 DNASE2BQ8WZ79 361 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 LMLNQ96KR4 655 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 NUP58Q9BVL2 599 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 SIX2Q9NPC8 291 aa20.62■□□□□ 0.89
CLN6-206ENST00000565471 UPK3BL1B0FP48 263 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 UPK3BL2E5RIL1 263 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 ARHGAP33O14559 1287 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 GIPC1O14908 333 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 TRUB2O95900 331 aaKnown RBP20.61■□□□□ 0.89
CLN6-206ENST00000565471 APOEP02649 317 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 GLI1P08151 1106 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 SYPP08247 313 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 ERCC5P28715 1186 aaPredicted RBP20.61■□□□□ 0.89
CLN6-206ENST00000565471 RPS24P62847 133 aaKnown RBP20.61■□□□□ 0.89
CLN6-206ENST00000565471 TTC17Q96AE7 1141 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 GPR174Q9BXC1 333 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 NUCKS1Q9H1E3 243 aaKnown RBP20.61■□□□□ 0.89
CLN6-206ENST00000565471 PCED1AQ9H1Q7 454 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 LHX5Q9H2C1 402 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 FSCN3Q9NQT6 498 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 ASNSD1Q9NWL6 643 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 STIM2Q9P246 746 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 DACH1Q9UI36 760 aa20.61■□□□□ 0.89
CLN6-206ENST00000565471 ASCC3Q8N3C0 2202 aaKnown RBP20.61■□□□□ 0.89
CLN6-206ENST00000565471 MEI4A8MW99 385 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 ASLP04424 464 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 PRKCSHP14314 528 aaPredicted RBP20.6■□□□□ 0.89
CLN6-206ENST00000565471 PTK2Q05397 1052 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 ZNF252P-AS1Q0IIN9 211 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 SEMA3BQ13214 749 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 EIF4EBP2Q13542 120 aaPredicted RBP20.6■□□□□ 0.89
CLN6-206ENST00000565471 DPCR1Q3MIW9 517 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 CCDC117Q8IWD4 279 aaPredicted RBP20.6■□□□□ 0.89
CLN6-206ENST00000565471 HDDC3Q8N4P3 179 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 WDTC1Q8N5D0 677 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 MYEOVQ96EZ4 313 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 BTN2A3PQ96KV6 586 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 NOX5Q96PH1 765 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 GTPBP2Q9BX10 602 aaKnown RBP20.6■□□□□ 0.89
CLN6-206ENST00000565471 PRSS16Q9NQE7 514 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 SUN2Q9UH99 717 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 DNAJC12Q9UKB3 198 aa20.6■□□□□ 0.89
CLN6-206ENST00000565471 TPRP12270 2363 aaKnown RBP20.6■□□□□ 0.89
CLN6-206ENST00000565471 ADAMTS9Q9P2N4 1935 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 METTL12A8MUP2 240 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 LUC7L3O95232 432 aaKnown RBP20.59■□□□□ 0.89
CLN6-206ENST00000565471 MOCS2O96007 188 aaPredicted RBP20.59■□□□□ 0.89
CLN6-206ENST00000565471 ZBTB16Q05516 673 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 CDH18Q13634 790 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 PLEKHG6Q3KR16 790 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 DCAF6Q58WW2 860 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 ZC3H12AQ5D1E8 599 aaKnown RBP20.59■□□□□ 0.89
CLN6-206ENST00000565471 CACUL1Q86Y37 369 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 MINDY1Q8N5J2 469 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 ZNF366Q8N895 744 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 PPP1R13BQ96KQ4 1090 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 SLC2A13Q96QE2 648 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 CPXM1Q96SM3 734 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 NUP62CLQ9H1M0 184 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 NDST4Q9H3R1 872 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 SLC32A1Q9H598 525 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.59■□□□□ 0.89
CLN6-206ENST00000565471 TJP2Q9UDY2 1190 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 XPO7Q9UIA9 1087 aaKnown RBP20.59■□□□□ 0.89
CLN6-206ENST00000565471 AJAP1Q9UKB5 411 aaPredicted RBP20.59■□□□□ 0.89
CLN6-206ENST00000565471 ACACBO00763 2458 aa20.59■□□□□ 0.89
CLN6-206ENST00000565471 A0A1B0GTW7 788 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 OPHN1O60890 802 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 HSF2BPO75031 334 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 SLC2A3P11169 496 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 TACR2P21452 398 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 MAOBP27338 520 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 SNX16P57768 344 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 VWA3BQ502W6 1294 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 EFHC1Q5JVL4 640 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 DCAF12L1Q5VU92 463 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 PIP4P1Q86T03 277 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 LGI2Q8N0V4 545 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 CARNMT1Q8N4J0 409 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 KDM1BQ8NB78 822 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 DEFB124Q8NES8 71 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 MYO19Q96H55 970 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 TUBGCP2Q9BSJ2 902 aa20.58■□□□□ 0.89
CLN6-206ENST00000565471 DNAAF2Q9NVR5 837 aaKnown RBP20.58■□□□□ 0.89
CLN6-206ENST00000565471 INTS6Q9UL03 887 aaKnown RBP20.58■□□□□ 0.89
CLN6-206ENST00000565471 CLCN1P35523 988 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 CSKP41240 450 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 ST8SIA6P61647 398 aa20.57■□□□□ 0.88
CLN6-206ENST00000565471 RPS14P62263 151 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms