RNA–Protein interactions for RNA: ENST00000565442.1

CHD9-215, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 2

Gene CHD9, Length 703 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-215ENST00000565442 PAPOLAP51003 745 aaKnown RBP5.03□□□□□ -1.6
CHD9-215ENST00000565442 RBM6P78332 1123 aaKnown RBP5.03□□□□□ -1.6
CHD9-215ENST00000565442 CFHR3Q02985 330 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 MFSD13AQ14CX5 517 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 ALFQ53S48 1182 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 TBC1D3GQ6DHY5 549 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 TBC1D3CQ6IPX1 549 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 CEP85Q6P2H3 762 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 TBC1D3Q8IZP1 549 aaPredicted RBP5.03□□□□□ -1.6
CHD9-215ENST00000565442 LINC01465Q8N7H1 131 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 OR52L2PQ8NGH6 319 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 FCRL4Q96PJ5 515 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 EIF2AK1Q9BQI3 630 aaKnown RBP5.03□□□□□ -1.6
CHD9-215ENST00000565442 ADGRE3Q9BY15 652 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 TWSG1Q9GZX9 223 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 ABHD16BQ9H3Z7 469 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 CDCP1Q9H5V8 836 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 G6PC2Q9NQR9 355 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 FZD4Q9ULV1 537 aa5.03□□□□□ -1.6
CHD9-215ENST00000565442 LRRFIP2Q9Y608 721 aaKnown RBP5.03□□□□□ -1.6
CHD9-215ENST00000565442 ZNF804BA4D1E1 1349 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 FAM90A20PA6NIJ5 464 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 TP73O15350 636 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 HEXIM1O94992 359 aaKnown RBP5.02□□□□□ -1.61
CHD9-215ENST00000565442 AGR2O95994 175 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 MT-CO3P00414 261 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 POLBP06746 335 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 DUSP1P28562 367 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 GRK5P34947 590 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 AGTR2P50052 363 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 TAS2R50P59544 299 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 HOXA4Q00056 320 aaPredicted RBP5.02□□□□□ -1.61
CHD9-215ENST00000565442 GAB1Q13480 694 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 SMAD1Q15797 465 aaKnown RBP5.02□□□□□ -1.61
CHD9-215ENST00000565442 FAM110CQ1W6H9 321 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 LRRC24Q50LG9 513 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 KLHL22Q53GT1 634 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 AWAT1Q58HT5 328 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 DGAT2L7PQ6IED9 249 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 C11orf87Q6NUJ2 197 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 TMEM65Q6PI78 240 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 LVRNQ6Q4G3 990 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 SERPINA13PQ6UXR4 307 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 KYAT3Q6YP21 454 aaKnown RBP5.02□□□□□ -1.61
CHD9-215ENST00000565442 TRIM72Q6ZMU5 477 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 TMEM57Q8N5G2 664 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 CEP70Q8NHQ1 597 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 GLMPQ8WWB7 406 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 SDCCAG3Q96C92 435 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 REPS1Q96D71 796 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 TRMT61AQ96FX7 289 aaKnown RBP5.02□□□□□ -1.61
CHD9-215ENST00000565442 KAZALD1Q96I82 304 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 BAG5Q9UL15 447 aa5.02□□□□□ -1.61
CHD9-215ENST00000565442 GCATO75600 419 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 CBSLP0DN79 551 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 CYP2D6P10635 497 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 ATF7P17544 494 aaPredicted RBP5.01□□□□□ -1.61
CHD9-215ENST00000565442 MATN1P21941 496 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 CBSP35520 551 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 CDK7P50613 346 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 FOXL2P58012 376 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 WDR5P61964 334 aaKnown RBP5.01□□□□□ -1.61
CHD9-215ENST00000565442 SSBP2P81877 361 aaPredicted RBP5.01□□□□□ -1.61
CHD9-215ENST00000565442 SLC12A1Q13621 1099 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 KCNB1Q14721 858 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 TBRG1Q3YBR2 411 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 WDR93Q6P2C0 686 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 DCDC5Q6ZRR9 648 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 LRRTM4Q86VH4 590 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 CPOQ8IVL8 374 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 PAF1Q8N7H5 531 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 SPATA3Q8NHX4 192 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 CLEC4CQ8WTT0 213 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 ASB12Q8WXK4 309 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 AKAP1Q92667 903 aaKnown RBP eCLIP5.01□□□□□ -1.61
CHD9-215ENST00000565442 USP13Q92995 863 aaPredicted RBP5.01□□□□□ -1.61
CHD9-215ENST00000565442 CCDC17Q96LX7 622 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 RMI1Q9H9A7 625 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 GGA3Q9NZ52 723 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 RCE1Q9Y256 329 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 DERAQ9Y315 318 aa5.01□□□□□ -1.61
CHD9-215ENST00000565442 TCRBV5S1A1TA0A578 114 aa5□□□□□ -1.61
CHD9-215ENST00000565442 TARM1B6A8C7 271 aa5□□□□□ -1.61
CHD9-215ENST00000565442 STX16-NPEPL1H3BU86 382 aa5□□□□□ -1.61
CHD9-215ENST00000565442 SMIM22K7EJ46 135 aa5□□□□□ -1.61
CHD9-215ENST00000565442 STX16O14662 325 aa5□□□□□ -1.61
CHD9-215ENST00000565442 JTBO76095 146 aa5□□□□□ -1.61
CHD9-215ENST00000565442 KAT7O95251 611 aa5□□□□□ -1.61
CHD9-215ENST00000565442 TFRCP02786 760 aaKnown RBP5□□□□□ -1.61
CHD9-215ENST00000565442 SLC3A2P08195 630 aaKnown RBP5□□□□□ -1.61
CHD9-215ENST00000565442 CYP3A4P08684 503 aa5□□□□□ -1.61
CHD9-215ENST00000565442 SLC8A1P32418 973 aa5□□□□□ -1.61
CHD9-215ENST00000565442 STAT6P42226 847 aa5□□□□□ -1.61
CHD9-215ENST00000565442 RCAN1P53805 252 aa5□□□□□ -1.61
CHD9-215ENST00000565442 CNGA3Q16281 694 aa5□□□□□ -1.61
CHD9-215ENST00000565442 MTX3Q5HYI7 312 aa5□□□□□ -1.61
CHD9-215ENST00000565442 KIAA1324Q6UXG2 1013 aaKnown RBP5□□□□□ -1.61
CHD9-215ENST00000565442 MMS22LQ6ZRQ5 1243 aa5□□□□□ -1.61
CHD9-215ENST00000565442 RINLQ6ZS11 566 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms