RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 SYN2Q92777 582 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 CYFIP2Q96F07 1278 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 FUBP3Q96I24 572 aaKnown RBP eCLIP5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 HEXIM2Q96MH2 286 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 PCDHB18PQ96TA0 734 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 SMOQ99835 787 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 NSUN3Q9H649 340 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 TLE6Q9H808 572 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 FBRSQ9HAH7 460 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 CSNK1G1Q9HCP0 422 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 ABHD10Q9NUJ1 306 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 INTS7Q9NVH2 962 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 MTMR10Q9NXD2 777 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 ARHGAP20Q9P2F6 1191 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 TSPAN16Q9UKR8 245 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 KIAA1257Q9ULG3 409 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 POLR3KQ9Y2Y1 108 aaPredicted RBP5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 LUC7L2Q9Y383 392 aaKnown RBP5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 YIPF1Q9Y548 306 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 CORINQ9Y5Q5 1042 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 HCFC2Q9Y5Z7 792 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 MYO7AQ13402 2215 aa5.48□□□□□ -1.53
HERPUD1-207ENST00000563781 UNC80Q8N2C7 3258 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 E2F8A0AVK6 867 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 HHLA1C9JL84 531 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 F8VP50 259 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 M0QYV0 167 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 IFRD1O00458 451 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 DDX3XO00571 662 aaKnown RBP eCLIP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 PLD2O14939 933 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 LINC01565O15544 149 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 BEST1O76090 585 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 C8AP07357 584 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 PLEKP08567 350 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 TPM1P09493 284 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 SPATA31D3P0C874 917 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 FAM200BP0CF97 657 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 ATF6P18850 670 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 CDH5P33151 784 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 GPD2P43304 727 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 RPL34P49207 117 aaKnown RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 PDE6CP51160 858 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 BCAT1P54687 386 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 ETF1P62495 437 aaKnown RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 NOMO3P69849 1222 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 CDR2Q01850 454 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 KLHL30Q0D2K2 578 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 SMARCB1Q12824 385 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 DUSP4Q13115 394 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 CDK5R2Q13319 367 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 STILQ15468 1287 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 ASTE1Q2TB18 679 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 SDHAF4Q5VUM1 108 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 TAF3Q5VWG9 929 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 NXNQ6DKJ4 435 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 VSTM1Q6UX27 236 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 C4orf50Q6ZRC1 276 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 GK5Q6ZS86 529 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 CLEC20AQ6ZU45 233 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 SPATA31D4Q6ZUB0 917 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 GPRIN1Q7Z2K8 1008 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 RBM23Q86U06 439 aaKnown RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 ZNF677Q86XU0 584 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 ZDHHC13Q8IUH4 622 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 TMEM139Q8IV31 216 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 HID1Q8IV36 788 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 PASD1Q8IV76 773 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 CNGA4Q8IV77 575 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 WDR75Q8IWA0 830 aaKnown RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 DRC7Q8IY82 874 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 WDTC1Q8N5D0 677 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 DEFB123Q8N688 67 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 EFHBQ8N7U6 833 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 ANKRD52Q8NB46 1076 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 STKLD1Q8NE28 680 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 ZNF397Q8NF99 534 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 OR8K1Q8NGG5 319 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 RIN3Q8TB24 985 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 SLC7A14Q8TBB6 771 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 SHKBP1Q8TBC3 707 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 UBA3Q8TBC4 463 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 SLC35F5Q8WV83 523 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 SECISBP2LQ93073 1101 aaKnown RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 ZNF707Q96C28 371 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 SMARCD1Q96GM5 515 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 PANX2Q96RD6 677 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 KCNK16Q96T55 309 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 CDCA3Q99618 268 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 CDX2Q99626 313 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 CHP1Q99653 195 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 AGPAT1Q99943 283 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 MED10Q9BTT4 135 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 DUSP16Q9BY84 665 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 ASPSCR1Q9BZE9 553 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 PLEKHA4Q9H4M7 779 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 HAUS4Q9H6D7 363 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 CYP4F11Q9HBI6 524 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 DMAP1Q9NPF5 467 aaPredicted RBP5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 MAN1C1Q9NR34 630 aa5.47□□□□□ -1.53
HERPUD1-207ENST00000563781 TAS2R14Q9NYV8 317 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms