RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 SYNCQ9H7C4 482 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 FBRSL1Q9HCM7 1045 aaKnown RBP15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 ADAM22Q9P0K1 906 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 TBC1D14Q9P2M4 693 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 ADAM21Q9UKJ8 722 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 TLR6Q9Y2C9 796 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 SH3BP1Q9Y3L3 701 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 MYO18AQ92614 2054 aaKnown RBP15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 POLR3GO15318 223 aaPredicted RBP15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 PI15O43692 258 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 TMEM253P0C7T8 217 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 CXCR5P32302 372 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 OPRD1P41143 372 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 MATKP42679 507 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 FAM133BQ5BKY9 247 aaKnown RBP15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 LY6G5CQ5SRR4 150 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 PHLDB2Q86SQ0 1253 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 RALGPS2Q86X27 583 aaPredicted RBP15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 TMEM25Q86YD3 366 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 ETFBKMTQ8IXQ9 262 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 CCDC105Q8IYK2 499 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 PHTF2Q8N3S3 785 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 C3orf20Q8ND61 904 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 LRFN3Q9BTN0 628 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 TRIM62Q9BVG3 475 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 ISCUQ9H1K1 167 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 LTB4R2Q9NPC1 389 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 ANLNQ9NQW6 1124 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 MARK1Q9P0L2 795 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 XPO7Q9UIA9 1087 aaKnown RBP15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 STRIP2Q9ULQ0 834 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 HPCAL4Q9UM19 191 aa15.31■□□□□ 0.04
SCAMP2-203ENST00000563663 C2CD4BA6NLJ0 364 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 SLC9A3R1O14745 358 aaPredicted RBP15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 HOXC11O43248 304 aaPredicted RBP15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 NFATC1O95644 943 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 TNFAIP3P21580 790 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 RRM1P23921 792 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 NOS2P35228 1153 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 VCPP55072 806 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 HADHBP55084 474 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 SNX16P57768 344 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 RAB6CQ53S08 254 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 RNF43Q68DV7 783 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 NADSYN1Q6IA69 706 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 DENND1CQ8IV53 801 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 IFT20Q8IY31 132 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 EMC1Q8N766 993 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 TMEM105Q8N8V8 129 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 PJA1Q8NG27 643 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 CAVIN3Q969G5 261 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 MYEOVQ96EZ4 313 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 PGAP3Q96FM1 320 aaPredicted RBP15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 SERPINB11Q96P15 392 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 C1QTNF1Q9BXJ1 281 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 RAB6CQ9H0N0 254 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 C8orf33Q9H7E9 229 aaPredicted RBP15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 GDF3Q9NR23 364 aa15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 METTL5Q9NRN9 209 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 SEPT11Q9NVA2 429 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 DMGDHQ9UI17 866 aaKnown RBP15.3■□□□□ 0.04
SCAMP2-203ENST00000563663 DOCK4Q8N1I0 1966 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 KANSL1LA0AUZ9 987 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 KCNU1A8MYU2 1149 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 GOLGA8SH3BPF8 625 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 FTCDO95954 541 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 TMEM31Q5JXX7 168 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 C8orf74Q6P047 294 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 CPXM2Q8N436 756 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 CPA6Q8N4T0 437 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 FBXL6Q8N531 539 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 CSGALNACT1Q8TDX6 532 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 PBXIP1Q96AQ6 731 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 MSANTD3Q96H12 275 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 SPHK2Q9NRA0 654 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 RBM12Q9NTZ6 932 aaKnown RBP15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 PIGVQ9NUD9 493 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 TTC7AQ9ULT0 858 aaPredicted RBP15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 TRDMT1O14717 391 aaKnown RBP15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 LATS1O95835 1130 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 PENKP01210 267 aaPredicted RBP15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 AOC1P19801 751 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 SLC6A4P31645 630 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 RFC1P35251 1148 aaPredicted RBP15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 NOP2P46087 812 aaKnown RBP15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 SGSHP51688 502 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 ATXN1P54253 815 aaKnown RBP15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 GALCP54803 685 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 TBX4P57082 545 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 OGDHQ02218 1023 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 CCINQ13939 588 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 TMEM196Q5HYL7 178 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 FYB2Q5VWT5 728 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 PLEKHA7Q6IQ23 1121 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 SFTPA1Q8IWL2 248 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 RASGEF1CQ8N431 466 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 CLDN23Q96B33 292 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 VCPIP1Q96JH7 1222 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 TBCBQ99426 244 aa15.29■□□□□ 0.04
SCAMP2-203ENST00000563663 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms