RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 LRRC4CQ9HCJ2 640 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 SLC35C2Q9NQQ7 365 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 NINJ2Q9NZG7 142 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 ACTR3BQ9P1U1 418 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 FBLN5Q9UBX5 448 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 CNOT7Q9UIV1 285 aaKnown RBP5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 TCFL5Q9UL49 500 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 EXOC7Q9UPT5 735 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 KLHL20Q9Y2M5 609 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 ASB1Q9Y576 335 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 TRPV2Q9Y5S1 764 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 THSD7AQ9UPZ6 1657 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 RGPD1P0DJD0 1748 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 PTPRCP08575 1304 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 KIF16BQ96L93 1317 aa5.49□□□□□ -1.53
VPS35P1-201ENST00000563400 PRSS29PA6NIE9 313 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 FAM25EA8MYX2 175 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 NFIBO00712 420 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 DYNC1LI2O43237 492 aaPredicted RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 TNFSF14O43557 240 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 PHF2O75151 1096 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 CSPG5O95196 566 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 GCNT3O95395 438 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 TUBBP07437 444 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 FTH1P19P0C7X4 201 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 GZMAP12544 262 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 SERPINA4P29622 427 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 POLGP54098 1239 aaPredicted RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 GP2P55259 537 aaKnown RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 STARD6P59095 220 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 HTD2P86397 168 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 GRIN1Q05586 938 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 TNK2Q07912 1038 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 NSUN2Q08J23 767 aaKnown RBP eCLIP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 RPA4Q13156 261 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 ALG11Q2TAA5 492 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 RAB41Q5JT25 222 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 SYNE3Q6ZMZ3 975 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 MEX3BQ6ZN04 569 aaKnown RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 ARHGAP27Q6ZUM4 889 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 OTOAQ7RTW8 1153 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 RALYLQ86SE5 291 aaKnown RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 YAF2Q8IY57 180 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 RNF168Q8IYW5 571 aaPredicted RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 NAT16Q8N8M0 369 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 POMGNT2Q8NAT1 580 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 CEP76Q8TAP6 659 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 SHC3Q92529 594 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 RSC1A1Q92681 617 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 RBM17Q96I25 401 aaKnown RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 NR1H4Q96RI1 486 aaPredicted RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 API5Q9BZZ5 524 aaKnown RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 VEZTQ9HBM0 779 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 BTBD7Q9P203 1132 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 SUCLA2Q9P2R7 463 aaPredicted RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 RWDD3Q9Y3V2 267 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 FPGT-TNNI3KV9GXZ4 949 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 COL3A1P02461 1466 aaPredicted RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 RGPD5Q99666 1765 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 LIPT2A6NK58 231 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 TMEM232C9JQI7 657 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 PEX12O00623 359 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 KIF5CO60282 957 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 BCAS2O75934 225 aaPredicted RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 REC8O95072 547 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 IFNB1P01574 187 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 LRG1P02750 347 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 CYP19A1P11511 503 aaPredicted RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 SELLP14151 372 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 FERP16591 822 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 MST1P26927 711 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 ALDH1B1P30837 517 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 CRKLP46109 303 aaKnown RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 PIK3CGP48736 1102 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 IRAK1P51617 712 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 NOMO3P69849 1222 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 KCNAB1Q14722 419 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 LRRC24Q50LG9 513 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 STEAP3Q658P3 488 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 TTI2Q6NXR4 508 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 SEZ6L2Q6UXD5 910 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 ABHD15Q6UXT9 468 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 LPCAT2Q7L5N7 544 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 OTUD6AQ7L8S5 288 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 TMPRSS7Q7RTY8 843 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 IRF2BP1Q8IU81 584 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 RASGRP3Q8IV61 690 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 PEX5LQ8IYB4 626 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 DPP10Q8N608 796 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 TOP6BLQ8N6T0 577 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 LINC00116Q8NCU8 138 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 ANKRD20A12PQ8NF67 263 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 SPATA20Q8TB22 786 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 MRPS27Q92552 414 aaKnown RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 ARHGAP45Q92619 1136 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 ZNF75CPQ92670 426 aaPredicted RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 GATA6Q92908 595 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 PDLIM5Q96HC4 596 aaKnown RBP5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 CCDC114Q96M63 670 aa5.48□□□□□ -1.53
VPS35P1-201ENST00000563400 MED15Q96RN5 788 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms