RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 HOXC13P31276 330 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 BMPR1AP36894 532 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 GPS2Q13227 327 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 PDK1Q15118 436 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 SPDYCQ5MJ68 293 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 RWDD4Q6NW29 188 aaKnown RBP18.6■□□□□ 0.57
COMMD4-208ENST00000563220 TMC7Q7Z402 723 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 PCGF5Q86SE9 256 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 NAT8LQ8N9F0 302 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 CCDC110Q8TBZ0 833 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 OVCA2Q8WZ82 227 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 ALG13Q9NP73 1137 aaKnown RBP18.6■□□□□ 0.57
COMMD4-208ENST00000563220 PAK5Q9P286 719 aa18.6■□□□□ 0.57
COMMD4-208ENST00000563220 TGM5O43548 720 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 IGLV3-27P01718 113 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 HMBSP08397 361 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 ERVFC1P60507 584 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 GAD2Q05329 585 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 PRKD1Q15139 912 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-208ENST00000563220 PDZD4Q76G19 769 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-208ENST00000563220 DNAJB7Q7Z6W7 309 aaPredicted RBP18.59■□□□□ 0.57
COMMD4-208ENST00000563220 PPIL6Q8IXY8 311 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 ZNF276Q8N554 614 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 PDZD8Q8NEN9 1154 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 HTR3CQ8WXA8 447 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 C1orf74Q96LT6 269 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 SH3GL2Q99962 352 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 KLC2Q9H0B6 622 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 TSPYL1Q9H0U9 437 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 SSX2IPQ9Y2D8 614 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 INSL5Q9Y5Q6 135 aa18.59■□□□□ 0.57
COMMD4-208ENST00000563220 C5orf60A6NFR6 353 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 E9PAM4 449 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 GCATO75600 419 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 TUBP50607 506 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 BASP1P80723 227 aaKnown RBP18.58■□□□□ 0.57
COMMD4-208ENST00000563220 NRG1Q02297 640 aaPredicted RBP18.58■□□□□ 0.57
COMMD4-208ENST00000563220 CREMQ03060 361 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 AP1B1Q10567 949 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 PLD1Q13393 1074 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 HEATR6Q6AI08 1181 aaKnown RBP18.58■□□□□ 0.57
COMMD4-208ENST00000563220 SPRED2Q7Z698 418 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 CCNYQ8ND76 341 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 CDC42EP4Q9H3Q1 356 aaKnown RBP18.58■□□□□ 0.57
COMMD4-208ENST00000563220 MAFFQ9ULX9 164 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 SHOC2Q9UQ13 582 aa18.58■□□□□ 0.57
COMMD4-208ENST00000563220 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.58■□□□□ 0.56
COMMD4-208ENST00000563220 GOLGA8MH3BSY2 632 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 APOEP02649 317 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 CTNNB1P35222 781 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 ACTN2P35609 894 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 ATP5C1P36542 298 aaKnown RBP18.58■□□□□ 0.56
COMMD4-208ENST00000563220 SLC29A2Q14542 456 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 VEPH1Q14D04 833 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 TAF12Q16514 161 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 MS4A13Q5J8X5 152 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 LILRA6Q6PI73 481 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 LRIG3Q6UXM1 1119 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 ZNF683Q8IZ20 524 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 TBC1D31Q96DN5 1066 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 P2RY11Q96G91 374 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 TRMT2BQ96GJ1 504 aaKnown RBP18.58■□□□□ 0.56
COMMD4-208ENST00000563220 KLHL5Q96PQ7 755 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 RBM15Q96T37 977 aaKnown RBP eCLIP18.58■□□□□ 0.56
COMMD4-208ENST00000563220 LBHD1Q9BQE6 289 aaPredicted RBP18.58■□□□□ 0.56
COMMD4-208ENST00000563220 HTATIP2Q9BUP3 242 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 FOXP3Q9BZS1 431 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 MED4Q9NPJ6 270 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 RAB6BQ9NRW1 208 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 TRPM5Q9NZQ8 1165 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 RAD54BQ9Y620 910 aa18.58■□□□□ 0.56
COMMD4-208ENST00000563220 LINC01553A4QN01 128 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 PPP1R12AO14974 1030 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-208ENST00000563220 RIPK2O43353 540 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 TMEM63AO94886 807 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 ARHGEF15O94989 841 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 CSPG5O95196 566 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 MYOGP15173 224 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 DNAJB1P25685 340 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 HTR7P34969 479 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 KCNQ1P51787 676 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 EPHB3P54753 998 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 HSP90B2PQ58FF3 399 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 HECTD3Q5T447 861 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 FAXCQ5TGI0 409 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 HOOK3Q86VS8 718 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 ATP6V0D2Q8N8Y2 350 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 PSMG2Q969U7 264 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 CELF6Q96J87 481 aaKnown RBP18.57■□□□□ 0.56
COMMD4-208ENST00000563220 RUFY1Q96T51 708 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 TCF25Q9BQ70 676 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 LRRC4CQ9HCJ2 640 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 NDFIP2Q9NV92 336 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 MPP6Q9NZW5 540 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.57■□□□□ 0.56
COMMD4-208ENST00000563220 SLC12A6Q9UHW9 1150 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 DNMT3LQ9UJW3 386 aa18.57■□□□□ 0.56
COMMD4-208ENST00000563220 NDC80O14777 642 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 COCHO43405 550 aa18.56■□□□□ 0.56
COMMD4-208ENST00000563220 METTL18O95568 372 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms