RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 AVPR2P30518 371 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 HOXC13P31276 330 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 ADRA1BP35368 520 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 PCK1P35558 622 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 GRIA2P42262 883 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 KIR2DL1P43626 348 aaPredicted RBP13.89□□□□□ -0.19
CDH1-204ENST00000562118 HADHBP55084 474 aaKnown RBP13.89□□□□□ -0.19
CDH1-204ENST00000562118 ATP11AP98196 1134 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 GRSF1Q12849 480 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDH1-204ENST00000562118 SEMA3BQ13214 749 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 LRRC32Q14392 662 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 GAS6Q14393 721 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 PREPLQ4J6C6 727 aaPredicted RBP13.89□□□□□ -0.19
CDH1-204ENST00000562118 FBXL22Q6P050 247 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 RFWD3Q6PCD5 774 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 DCUN1D2Q6PH85 259 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 TPGS1Q6ZTW0 290 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 SND1Q7KZF4 910 aaKnown RBP eCLIP13.89□□□□□ -0.192e-7■■■■■ 28
CDH1-204ENST00000562118 FAM131BQ86XD5 332 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 HJURPQ8NCD3 748 aaPredicted RBP13.89□□□□□ -0.19
CDH1-204ENST00000562118 TTC16Q8NEE8 873 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 KCNV2Q8TDN2 545 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 XPO6Q96QU8 1125 aaKnown RBP13.89□□□□□ -0.19
CDH1-204ENST00000562118 PNKPQ96T60 521 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 EIF3CQ99613 913 aaKnown RBP13.89□□□□□ -0.19
CDH1-204ENST00000562118 RETREG1Q9H6L5 497 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 SLC12A6Q9UHW9 1150 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 CLEC4EQ9ULY5 219 aa13.89□□□□□ -0.19
CDH1-204ENST00000562118 MYO18AQ92614 2054 aaKnown RBP13.89□□□□□ -0.19
CDH1-204ENST00000562118 CACNA1IQ9P0X4 2223 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 NCAM2O15394 837 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 LRCH4O75427 683 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 KAT7O95251 611 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 MOCS2O96007 188 aaPredicted RBP13.88□□□□□ -0.19
CDH1-204ENST00000562118 EGFP01133 1207 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 CYBBP04839 570 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 H2AFZP0C0S5 128 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 C7P10643 843 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 TNFRSF4P43489 277 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 ENPP2Q13822 863 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 AUHQ13825 339 aaKnown RBP13.88□□□□□ -0.19
CDH1-204ENST00000562118 UBXN2BQ14CS0 331 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 ANO4Q32M45 955 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 RAP1GAP2Q684P5 730 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 H2AFVQ71UI9 128 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 PSTKQ8IV42 348 aaKnown RBP13.88□□□□□ -0.19
CDH1-204ENST00000562118 CCDC185Q8N715 623 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 ZNF557Q8N988 423 aaPredicted RBP13.88□□□□□ -0.19
CDH1-204ENST00000562118 FLCNQ8NFG4 579 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 FIBINQ8TAL6 211 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 WFDC5Q8TCV5 224 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 TMA16Q96EY4 203 aaKnown RBP13.88□□□□□ -0.19
CDH1-204ENST00000562118 NCAPGQ9BPX3 1015 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 NUP85Q9BW27 656 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 MFSD1Q9H3U5 465 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 DEF6Q9H4E7 631 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 PRMT8Q9NR22 394 aaPredicted RBP13.88□□□□□ -0.19
CDH1-204ENST00000562118 DNAJC17Q9NVM6 304 aaKnown RBP13.88□□□□□ -0.19
CDH1-204ENST00000562118 DEC1Q9P2X7 70 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 PPARGC1AQ9UBK2 798 aaKnown RBP13.88□□□□□ -0.19
CDH1-204ENST00000562118 LCMT1Q9UIC8 334 aa13.88□□□□□ -0.19
CDH1-204ENST00000562118 VPS13AQ96RL7 3174 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 SYNJ2BP-COX16A0A087WUM0 186 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 A0A1B0GVM2 712 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 GOLGA6L3A6NEY3 463 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 TCAF2A6NFQ2 919 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 SOWAHDA6NJG2 315 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 F5H5T6 163 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 TRIM24O15164 1050 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 LUC7L3O95232 432 aaKnown RBP13.87□□□□□ -0.19
CDH1-204ENST00000562118 NDUFA10O95299 355 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 TDGF1P13385 188 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 HLA-FP30511 346 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 MAN1A1P33908 653 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 DGKGP49619 791 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 GSDMDP57764 484 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 RPS24P62847 133 aaKnown RBP13.87□□□□□ -0.19
CDH1-204ENST00000562118 PIGHQ14442 188 aaPredicted RBP13.87□□□□□ -0.19
CDH1-204ENST00000562118 HSF5Q4G112 596 aaPredicted RBP13.87□□□□□ -0.19
CDH1-204ENST00000562118 GRAMD4Q6IC98 578 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 CXorf57Q6NSI4 855 aaKnown RBP13.87□□□□□ -0.19
CDH1-204ENST00000562118 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 CHST9Q7L1S5 443 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 C14orf80Q86SX3 495 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 CHSY1Q86X52 802 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 SFTPA1Q8IWL2 248 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 DDI1Q8WTU0 396 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 CTNNBL1Q8WYA6 563 aaPredicted RBP13.87□□□□□ -0.19
CDH1-204ENST00000562118 IGSF8Q969P0 613 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 PEBP4Q96S96 227 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 KCNH6Q9H252 994 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 ARHGEF4Q9NR80 690 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 TMPRSS4Q9NRS4 437 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 PLK2Q9NYY3 685 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 COX16Q9P0S2 106 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 FZD10Q9ULW2 581 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 NDRG2Q9UN36 371 aaKnown RBP13.87□□□□□ -0.19
CDH1-204ENST00000562118 TBC1D30Q9Y2I9 924 aa13.87□□□□□ -0.19
CDH1-204ENST00000562118 REXO2Q9Y3B8 237 aaKnown RBP13.87□□□□□ -0.19
CDH1-204ENST00000562118 EPN1Q9Y6I3 576 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms