RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 SLC9A4Q6AI14 798 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 TRMT10BQ6PF06 316 aaKnown RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 BNC2Q6ZN30 1099 aaPredicted RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 VSIG10LQ86VR7 867 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 EMC1Q8N766 993 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 KYQ8NBH2 561 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 SLC2A11Q9BYW1 496 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 CDH19Q9H159 772 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 PDZD7Q9H5P4 517 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 RHBDL2Q9NX52 303 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 FZD1Q9UP38 647 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 CEPT1Q9Y6K0 416 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 LRRIQ4A6NIV6 560 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 PRPSAP2O60256 369 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 ERBB2P04626 1255 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 KCNA2P16389 499 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 ZNF23P17027 643 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 CDH2P19022 906 aaPredicted RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 RBL1P28749 1068 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 GARSP41250 739 aaKnown RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 PPIDQ08752 370 aaKnown RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 NIPAL4Q0D2K0 466 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 MMRN1Q13201 1228 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 PDE1CQ14123 709 aaPredicted RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 FLOT2Q14254 428 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 TAF5Q15542 800 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 ZNF534Q76KX8 674 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 RSPH3Q86UC2 560 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 RP9Q8TA86 221 aaKnown RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 CNBD2Q96M20 576 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 CPXM1Q96SM3 734 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 TBCBQ99426 244 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 PRPF18Q99633 342 aaKnown RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 ADPGKQ9BRR6 497 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 TRIM56Q9BRZ2 755 aaKnown RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 NAT9Q9BTE0 207 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 JPH1Q9HDC5 661 aaPredicted RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 DDX18Q9NVP1 670 aaKnown RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 RSL24D1Q9UHA3 163 aaKnown RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 CYTH4Q9UIA0 394 aa19.14■□□□□ 0.65
BBS4-204ENST00000562084 GNEQ9Y223 722 aaKnown RBP19.14■□□□□ 0.65
BBS4-204ENST00000562084 RGSL1A5PLK6 1076 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 DCXO43602 365 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 ALDOAP04075 364 aaKnown RBP19.13■□□□□ 0.65
BBS4-204ENST00000562084 CD19P15391 556 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 KCNA4P22459 653 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 SLC5A2P31639 672 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 CDK9P50750 372 aaKnown RBP19.13■□□□□ 0.65
BBS4-204ENST00000562084 MTMR2Q13614 643 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 DPYSQ14117 519 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 LPIN1Q14693 890 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 HERC3Q15034 1050 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 MTERF2Q49AM1 385 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 PACS1Q6VY07 963 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 TSHZ1Q6ZSZ6 1077 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 C10orf107Q8IVU9 208 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 PHTF2Q8N3S3 785 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 PEBP4Q96S96 227 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 MMP19Q99542 508 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 XPNPEP3Q9NQH7 507 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 ZNHIT2Q9UHR6 403 aa19.13■□□□□ 0.65
BBS4-204ENST00000562084 LOC100653049A0A140TA62 436 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 TPP1O14773 563 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 KRT34O76011 436 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 STK10O94804 968 aaKnown RBP19.12■□□□□ 0.65
BBS4-204ENST00000562084 ASNSP08243 561 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 GLDCP23378 1020 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 SEMA5AQ13591 1074 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 PRKG1Q13976 671 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 SYCP2LQ5T4T6 812 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 C16orf46Q6P387 395 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 ABHD15Q6UXT9 468 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 RNF168Q8IYW5 571 aaPredicted RBP19.12■□□□□ 0.65
BBS4-204ENST00000562084 FNDC8Q8TC99 324 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 FERMT1Q9BQL6 677 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 MTMR12Q9C0I1 747 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 ZNF408Q9H9D4 720 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 ADAM28Q9UKQ2 775 aa19.12■□□□□ 0.65
BBS4-204ENST00000562084 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.11■□□□□ 0.65
BBS4-204ENST00000562084 PRSS51A0A1B0GVH4 220 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 E9PBE3 544 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 ATP6V1B1P15313 513 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 ZFXP17010 805 aaPredicted RBP19.11■□□□□ 0.65
BBS4-204ENST00000562084 TUBA4AP68366 448 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 RFTN1Q14699 578 aaPredicted RBP19.11■□□□□ 0.65
BBS4-204ENST00000562084 ZNF423Q2M1K9 1284 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 PIGGQ5H8A4 983 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 CYP4V2Q6ZWL3 525 aaPredicted RBP19.11■□□□□ 0.65
BBS4-204ENST00000562084 CCDC60Q8IWA6 550 aaPredicted RBP19.11■□□□□ 0.65
BBS4-204ENST00000562084 BBS5Q8N3I7 341 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 KBTBD7Q8WVZ9 684 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 ZNF670Q9BS34 389 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 NR2E3Q9Y5X4 410 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 KPNA7A9QM74 516 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 PSMC3P17980 439 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 FSTL1Q12841 308 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 PGAM4Q8N0Y7 254 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 CPXCR1Q8N123 301 aa19.11■□□□□ 0.65
BBS4-204ENST00000562084 CPSF7Q8N684 471 aaKnown RBP19.11■□□□□ 0.65
BBS4-204ENST00000562084 NLRP7Q8WX94 980 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms