RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 AGGF1Q8N302 714 aaeCLIP13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 COLGALT1Q8NBJ5 622 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 CCDC197Q8NCU1 140 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 GSDMBQ8TAX9 411 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 MGARPQ8TDB4 240 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 MZB1Q8WU39 189 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 HDAC11Q96DB2 347 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 CFAP36Q96G28 342 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 HAPLN3Q96S86 360 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 VAT1Q99536 393 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 EBNA1BP2Q99848 306 aaKnown RBP13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 TMEM175Q9BSA9 504 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 NAT9Q9BTE0 207 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 OXCT2Q9BYC2 517 aaPredicted RBP13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 MRPL9Q9BYD2 267 aaKnown RBP13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 ANLNQ9NQW6 1124 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 SAMD15Q9P1V8 674 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 ZNF180Q9UJW8 692 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 SCML2Q9UQR0 700 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 PCDHB7Q9Y5E2 793 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 PCDHB5Q9Y5E4 795 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 IKBKGQ9Y6K9 419 aa13.02□□□□□ -0.33
AC055717.2-201ENST00000561864 GOLGA6L7A0A1B0GV03 622 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 ENPP3O14638 875 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 FGF10O15520 208 aaPredicted RBP13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 TYROBPO43914 113 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 NBNO60934 754 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 FAM155BO75949 473 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 APOEP02649 317 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 INHBAP08476 426 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 HOXC13P31276 330 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 CORO7P57737 925 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 IFRD2Q12894 506 aaPredicted RBP13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 ELAVL2Q12926 359 aaKnown RBP13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 VARS2Q5ST30 1063 aaKnown RBP13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 STEAP4Q687X5 459 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 ITPRIPL1Q6GPH6 555 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 MSANTD2Q6P1R3 559 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 LRRC8BQ6P9F7 803 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 C6orf89Q6UWU4 347 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 RGS9BPQ6ZS82 235 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 CYS1Q717R9 158 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 PIGWQ7Z7B1 504 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 ZNF567Q8N184 647 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 CCNYQ8ND76 341 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 DENND1AQ8TEH3 1009 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 RNF34Q969K3 372 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 SIGLEC10Q96LC7 697 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 FBXO44Q9H4M3 255 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 ABI2Q9NYB9 513 aaPredicted RBP13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 DNAJB4Q9UDY4 337 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 OR12D3Q9UGF7 316 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 ADAM28Q9UKQ2 775 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 TRHDEQ9UKU6 1024 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 LRFN2Q9ULH4 789 aa13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 PRG3Q9Y2Y8 225 aaPredicted RBP13.01□□□□□ -0.33
AC055717.2-201ENST00000561864 ERI2A8K979 691 aaKnown RBP13□□□□□ -0.33
AC055717.2-201ENST00000561864 FOXO6A8MYZ6 492 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 TCP11X1B4DZS4 312 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 AVILO75366 819 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 LRIG2O94898 1065 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 PARNO95453 639 aaKnown RBP13□□□□□ -0.33
AC055717.2-201ENST00000561864 ASMTLO95671 621 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 C1QAP02745 245 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 FGFR3P22607 806 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 PTPN3P26045 913 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 EPHB2P29323 1055 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 CCR1P32246 355 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 NRG1Q02297 640 aaPredicted RBP13□□□□□ -0.33
AC055717.2-201ENST00000561864 SMARCB1Q12824 385 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 NAB1Q13506 487 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 MRPL58Q14197 206 aaKnown RBP13□□□□□ -0.33
AC055717.2-201ENST00000561864 LRRC14Q15048 493 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 KBTBD12Q3ZCT8 623 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 CTXN3Q4LDR2 81 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 SYCP2LQ5T4T6 812 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 LGSNQ5TDP6 509 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 TTC39BQ5VTQ0 682 aaPredicted RBP13□□□□□ -0.33
AC055717.2-201ENST00000561864 UNC5AQ6ZN44 842 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 SCD5Q86SK9 330 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 TAX1BP1Q86VP1 789 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 MON1AQ86VX9 555 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 SLC26A11Q86WA9 606 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 NPAS4Q8IUM7 802 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 SCN4BQ8IWT1 228 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 NUP93Q8N1F7 819 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 CCDC33Q8N5R6 958 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 LZTR1Q8N653 840 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 NPWQ8N729 165 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 ANKS4BQ8N8V4 417 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 DBF4BQ8NFT6 615 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 SCAMP5Q8TAC9 235 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 LRRN4Q8WUT4 740 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 GRAMD1AQ96CP6 724 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 STAMBPL1Q96FJ0 436 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 CABS1Q96KC9 395 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 SERPINB11Q96P15 392 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 CASD1Q96PB1 797 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 COMMD8Q9NX08 183 aa13□□□□□ -0.33
AC055717.2-201ENST00000561864 SEPT10Q9P0V9 454 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms