RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 XPO7Q9UIA9 1087 aaKnown RBP10.68□□□□□ -0.7
CLK3-205ENST00000561673 DNAJC12Q9UKB3 198 aa10.68□□□□□ -0.7
CLK3-205ENST00000561673 WDFY3Q8IZQ1 3526 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 SPEGQ15772 3267 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 GIPC1O14908 333 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 TRUB2O95900 331 aaKnown RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 MOCS2O96007 188 aaPredicted RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 IGLV3-25P01717 112 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 ATP5BP06576 529 aaKnown RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 SERPINF2P08697 491 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 DLDP09622 509 aaKnown RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 PNMA6AP0CW24 399 aaPredicted RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 MAPK8P45983 427 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 PITX1P78337 314 aaPredicted RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 PTK2Q05397 1052 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 EIF4EBP2Q13542 120 aaPredicted RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 CAMK2GQ13555 558 aaPredicted RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 UAP1L1Q3KQV9 507 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 DCAF6Q58WW2 860 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 MS4A13Q5J8X5 152 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 SYCP2LQ5T4T6 812 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 PSAPL1Q6NUJ1 521 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 CLEC17AQ6ZS10 378 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 SLC47A2Q86VL8 602 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 PASD1Q8IV76 773 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 MFN1Q8IWA4 741 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 FAM114A1Q8IWE2 563 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 CFAP52Q8N1V2 620 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 ZNF366Q8N895 744 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 HJURPQ8NCD3 748 aaPredicted RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 FOXJ1Q92949 421 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 PPP1R13BQ96KQ4 1090 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 CNTNAP3BQ96NU0 1288 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 DDX50Q9BQ39 737 aaKnown RBP10.67□□□□□ -0.7
CLK3-205ENST00000561673 TUBGCP2Q9BSJ2 902 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 GPR174Q9BXC1 333 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 CNTNAP3Q9BZ76 1288 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 LHX5Q9H2C1 402 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 CAPN10Q9HC96 672 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 LMBRD1Q9NUN5 540 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 PCDHGC3Q9UN70 934 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 SLC6A14Q9UN76 642 aa10.67□□□□□ -0.7
CLK3-205ENST00000561673 FRYQ5TBA9 3013 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 IGLV3-19P01714 112 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 APOEP02649 317 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 ACADMP11310 421 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 POLR2EP19388 210 aaKnown RBP10.66□□□□□ -0.7
CLK3-205ENST00000561673 MAOBP27338 520 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 OXTRP30559 389 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 KRT9P35527 623 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 NOVA1P51513 510 aaKnown RBP10.66□□□□□ -0.7
CLK3-205ENST00000561673 GFPT1Q06210 699 aaPredicted RBP10.66□□□□□ -0.7
CLK3-205ENST00000561673 KCNMA1Q12791 1236 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 FSCBQ5H9T9 825 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 SH3PXD2AQ5TCZ1 1133 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 SMYD5Q6GMV2 418 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 MMS22LQ6ZRQ5 1243 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 RABEPKQ7Z6M1 372 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 CACUL1Q86Y37 369 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 FAM71AQ8IYT1 594 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 RGL4Q8IZJ4 473 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 DEFB106AQ8N104 65 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 CARNMT1Q8N4J0 409 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 ZNF557Q8N988 423 aaPredicted RBP10.66□□□□□ -0.7
CLK3-205ENST00000561673 CADM4Q8NFZ8 388 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 OR2T3Q8NH03 318 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 TTC17Q96AE7 1141 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 BTN2A3PQ96KV6 586 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 SLC2A13Q96QE2 648 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 NUP58Q9BVL2 599 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 GTPBP2Q9BX10 602 aaKnown RBP10.66□□□□□ -0.7
CLK3-205ENST00000561673 PRSS16Q9NQE7 514 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 SAMSN1Q9NSI8 373 aaKnown RBP10.66□□□□□ -0.7
CLK3-205ENST00000561673 DACH1Q9UI36 760 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 INTS6Q9UL03 887 aaKnown RBP10.66□□□□□ -0.7
CLK3-205ENST00000561673 NUP205Q92621 2012 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 PLXND1Q9Y4D7 1925 aa10.66□□□□□ -0.7
CLK3-205ENST00000561673 SYNJ2BP-COX16A0A087WUM0 186 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 TYW5A2RUC4 315 aaKnown RBP10.65□□□□□ -0.7
CLK3-205ENST00000561673 KCNU1A8MYU2 1149 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 PES1O00541 588 aaKnown RBP10.65□□□□□ -0.7
CLK3-205ENST00000561673 ARHGAP33O14559 1287 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 GRAP2O75791 330 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 ERBB2P04626 1255 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 GLI1P08151 1106 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 C7P10643 843 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 CEACAM1P13688 526 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 TACR2P21452 398 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 PMLP29590 882 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 ANP32AP39687 249 aaKnown RBP10.65□□□□□ -0.7
CLK3-205ENST00000561673 CSKP41240 450 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 ATXN3P54252 364 aaPredicted RBP10.65□□□□□ -0.7
CLK3-205ENST00000561673 CDK17Q00537 523 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 CDH18Q13634 790 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 KCNJ12Q14500 433 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 TCP11X2Q5H9J9 407 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 CT47A1Q5JQC4 288 aaPredicted RBP10.65□□□□□ -0.7
CLK3-205ENST00000561673 EFHC1Q5JVL4 640 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 WDR45BQ5MNZ6 344 aa10.65□□□□□ -0.7
CLK3-205ENST00000561673 KLHDC7AQ5VTJ3 777 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms