RNA–Protein interactions for RNA: ENST00000561354.1

CARMIL3-204, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 4

Gene CARMIL3, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-204ENST00000561354 IGLV3-27P01718 113 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 SETSIPP0DME0 302 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 VDRP11473 427 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 POLR2EP19388 210 aaKnown RBP12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 CTSKP43235 329 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 DAOAP59103 153 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 YWHAEP62258 255 aaKnown RBP12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 KRT85P78386 507 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 CAMK2BQ13554 666 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 SMAD1Q15797 465 aaKnown RBP12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 CBWD6Q4V339 395 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 PKDCCQ504Y2 493 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 CBWD3Q5JTY5 395 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 CBWD5Q5RIA9 395 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 PIK3R6Q5UE93 754 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 NUGGCQ68CJ6 796 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 ZNF776Q68DI1 518 aaPredicted RBP12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 USP30Q70CQ3 517 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 UNC45BQ8IWX7 931 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 UBA3Q8TBC4 463 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 IRGQQ8WZA9 623 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 EEF2KMTQ96G04 330 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 RSPH9Q9H1X1 276 aaPredicted RBP12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 NCKAP1Q9Y2A7 1128 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 ACACAQ13085 2346 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 KNL1Q8NG31 2342 aa12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 FASNP49327 2511 aaKnown RBP12.31□□□□□ -0.44
CARMIL3-204ENST00000561354 ANKRD11Q6UB99 2663 aaPredicted RBP12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 A0A1W2PQ27 194 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 A0A1W2PQ64 194 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 E9PAM4 449 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 H0Y8X5 98 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 VILLO15195 856 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 MSI1O43347 362 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 IGHV4-34P06331 123 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 CD19P15391 556 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 CD70P32970 193 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 SLC11A2P49281 568 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 SGSHP51688 502 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 RACK1P63244 317 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 SFSWAPQ12872 951 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 ARID5BQ14865 1188 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 INAVAQ3KP66 663 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 FAM133BQ5BKY9 247 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 KIAA0895LQ68EN5 471 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 LCLAT1Q6UWP7 414 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 UBR7Q8N806 425 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 PDCD7Q8N8D1 485 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 KDM1BQ8NB78 822 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 FIBINQ8TAL6 211 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 WFDC5Q8TCV5 224 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 SLC35F5Q8WV83 523 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 HNRNPLLQ8WVV9 542 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 MYO19Q96H55 970 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 LMLNQ96KR4 655 aa12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 PABPC3Q9H361 631 aaKnown RBP12.3□□□□□ -0.44
CARMIL3-204ENST00000561354 TMEM131Q92545 1883 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 A0A087WV48 116 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 A0A1B0GTQ1 180 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 A0A1W2PPC4 97 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 GOLGA8CPA6NN73 597 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 KCNK3O14649 394 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 SLC16A3O15427 465 aaKnown RBP12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 ACSL4O60488 711 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 TBL1XO60907 577 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 ZNF202O95125 648 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 ASLP04424 464 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 PAEPP09466 180 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 LCP1P13796 627 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 PTMSP20962 102 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 TBXAS1P24557 533 aaPredicted RBP12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 SLC6A4P31645 630 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 ST8SIA6P61647 398 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 CYP4F3Q08477 520 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 HNRNPA1L2Q32P51 320 aaKnown RBP12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 KCNT1Q5JUK3 1230 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 TCERG1LQ5VWI1 586 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 RFWD3Q6PCD5 774 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 LAYNQ6UX15 382 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 ADAT2Q7Z6V5 191 aaKnown RBP12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 SCUBE3Q8IX30 993 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 SKA1Q96BD8 255 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 CCDC34Q96HJ3 373 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 DDX50Q9BQ39 737 aaKnown RBP12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 ACE2Q9BYF1 805 aaPredicted RBP12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 FBXL12Q9NXK8 326 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 PCDHGA1Q9Y5H4 931 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 APC2O95996 2303 aa12.29□□□□□ -0.44
CARMIL3-204ENST00000561354 URB1O60287 2271 aaKnown RBP12.28□□□□□ -0.44
CARMIL3-204ENST00000561354 FREM2Q5SZK8 3169 aa12.28□□□□□ -0.44
CARMIL3-204ENST00000561354 GOLGA6L7A0A1B0GV03 622 aa12.28□□□□□ -0.44
CARMIL3-204ENST00000561354 C10orf142B7Z368 130 aa12.28□□□□□ -0.44
CARMIL3-204ENST00000561354 RNASEH1O60930 286 aaKnown RBP12.28□□□□□ -0.44
CARMIL3-204ENST00000561354 GABBR2O75899 941 aa12.28□□□□□ -0.44
CARMIL3-204ENST00000561354 CDK4P11802 303 aa12.28□□□□□ -0.44
CARMIL3-204ENST00000561354 GALCP54803 685 aa12.28□□□□□ -0.44
CARMIL3-204ENST00000561354 C21orf59P57076 290 aa12.28□□□□□ -0.44
CARMIL3-204ENST00000561354 TBX4P57082 545 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms