RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 PDGFRAP16234 1089 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 RDXP35241 583 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 GSCP56915 257 aaPredicted RBP20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 SRSF5Q13243 272 aaKnown RBP20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 C15orf59Q2T9L4 293 aaPredicted RBP20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 BRMS1LQ5PSV4 323 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 ANO7Q6IWH7 933 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 DNAJC24Q6P3W2 148 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 TMEM92Q6UXU6 159 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 CIR1Q86X95 450 aaPredicted RBP20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 DNAAF5Q86Y56 855 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 CAMKK1Q8N5S9 505 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 C3orf20Q8ND61 904 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 KCNV2Q8TDN2 545 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 ERLEC1Q96DZ1 483 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 SIK2Q9H0K1 926 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 ANLNQ9NQW6 1124 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 CACNA2D2Q9NY47 1150 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 GGA2Q9UJY4 613 aa20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.61■□□□□ 0.89
TSPAN3-210ENST00000561277 DDX3XO00571 662 aaKnown RBP eCLIP20.6■□□□□ 0.891e-9■■■■■ 47.1
TSPAN3-210ENST00000561277 PAGE1O75459 146 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 ADCY5O95622 1261 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 HNRNPLP14866 589 aaKnown RBP eCLIP20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 RRM1P23921 792 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 NTSR1P30989 418 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 HOXA6P31267 233 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 SDC4P31431 198 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 CASP14P31944 242 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 CD70P32970 193 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 CXCR3P49682 368 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 CDH18Q13634 790 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 SPECC1LQ69YQ0 1117 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 ALYREFQ86V81 257 aaKnown RBP20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 FAM131BQ86XD5 332 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 CCDC117Q8IWD4 279 aaPredicted RBP20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 MCOLN2Q8IZK6 566 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 SORCS1Q8WY21 1168 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 PRMT1Q99873 361 aaKnown RBP20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 ELOVL2Q9NXB9 296 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 PAXBP1Q9Y5B6 917 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 HS3ST4Q9Y661 456 aa20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 MYO18AQ92614 2054 aaKnown RBP20.6■□□□□ 0.89
TSPAN3-210ENST00000561277 C2CD4BA6NLJ0 364 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 LILRB5O75023 590 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 PABPC1P11940 636 aaKnown RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 HOXB2P14652 356 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 RFC1P35251 1148 aaPredicted RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 MRE11P49959 708 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 DGKEP52429 567 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 CCDC14Q49A88 953 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 TMEM215Q68D42 235 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 RNF43Q68DV7 783 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 SDE2Q6IQ49 451 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 CHST9Q7L1S5 443 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 ASCL5Q7RTU5 278 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 UCMAQ8WVF2 138 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 SYN2Q92777 582 aaPredicted RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 RPRD1AQ96P16 312 aaPredicted RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 MCEEQ96PE7 176 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 TMPRSS4Q9NRS4 437 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 ARHGEF38Q9NXL2 777 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 VANGL2Q9ULK5 521 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 H0Y626 953 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 I6L893 689 aaPredicted RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 ATMINO43313 823 aaPredicted RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 LUC7L3O95232 432 aaKnown RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 MTA1Q13330 715 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 AUHQ13825 339 aaKnown RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 EIF4HQ15056 248 aaKnown RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 RAB6CQ53S08 254 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 RABGAP1LQ5R372 815 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 SH3PXD2AQ5TCZ1 1133 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 HGSNATQ68CP4 663 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 PPP1R2P3Q6NXS1 205 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 FBXL22Q6P050 247 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 WDR5BQ86VZ2 330 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 AHI1Q8N157 1196 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 ZNF557Q8N988 423 aaPredicted RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 TPSD1Q9BZJ3 242 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 RAB6CQ9H0N0 254 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 POLMQ9NP87 494 aaPredicted RBP20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 SNX10Q9Y5X0 201 aa20.59■□□□□ 0.89
TSPAN3-210ENST00000561277 TCRBV21S2A2A0A5A6 115 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 ANKRD62A6NC57 917 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 PRR23AA6NEV1 266 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 SIGLEC16A6NMB1 481 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 WASH3PC4AMC7 463 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 AXIN1O15169 862 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 GFRA3O60609 400 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 GPD1P21695 349 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 LMAN2Q12907 356 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 WDR59Q6PJI9 974 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 BNIPLQ7Z465 357 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 MDGA1Q8NFP4 955 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 FIBINQ8TAL6 211 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 WFIKKN2Q8TEU8 576 aa20.58■□□□□ 0.88
TSPAN3-210ENST00000561277 HMGB4Q8WW32 186 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms