RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 STARD13Q9Y3M8 1113 aa14.4□□□□□ -0.1
TPM1-230ENST00000561266 HS3ST4Q9Y661 456 aa14.4□□□□□ -0.1
TPM1-230ENST00000561266 CKAP5Q14008 2032 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 SIGLEC16A6NMB1 481 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 HRO43593 1189 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 APOEP02649 317 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 FTLP02792 175 aaPredicted RBP14.39□□□□□ -0.11
TPM1-230ENST00000561266 CYBBP04839 570 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 PDGFRAP16234 1089 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 CCR1P32246 355 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 GBP1P32455 592 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 DEUP1Q05D60 604 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 AUHQ13825 339 aaKnown RBP14.39□□□□□ -0.11
TPM1-230ENST00000561266 PPP2R5DQ14738 602 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 FBXL22Q6P050 247 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 ADIPOR2Q86V24 386 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 CHSY1Q86X52 802 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 FAM131BQ86XD5 332 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 ZNF513Q8N8E2 541 aaPredicted RBP14.39□□□□□ -0.11
TPM1-230ENST00000561266 ATP6V0D2Q8N8Y2 350 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 MSANTD4Q8NCY6 345 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 C3orf20Q8ND61 904 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 OR52K2Q8NGK3 314 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 SYN2Q92777 582 aaPredicted RBP14.39□□□□□ -0.11
TPM1-230ENST00000561266 RNF34Q969K3 372 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 EXOC4Q96A65 974 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 TKTL2Q9H0I9 626 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 ABCB8Q9NUT2 735 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 ZSCAN32Q9NX65 697 aa14.39□□□□□ -0.11
TPM1-230ENST00000561266 SPAG17Q6Q759 2223 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 A0A087X0T9 212 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 PROB1E7EW31 1015 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 CNTN5O94779 1100 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 CALB1P05937 261 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 CCDC172P0C7W6 258 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 FAM228BP0C875 321 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 KRT3P12035 628 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 HDAC4P56524 1084 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 LMAN2Q12907 356 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 CRY1Q16526 586 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 CDO1Q16878 200 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 KIAA1211LQ6NV74 962 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 ASCL5Q7RTU5 278 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.38□□□□□ -0.11
TPM1-230ENST00000561266 CENPIQ92674 756 aaPredicted RBP14.38□□□□□ -0.11
TPM1-230ENST00000561266 FAM122AQ96E09 287 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 SELENOOQ9BVL4 669 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 SLC2A11Q9BYW1 496 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 SIK2Q9H0K1 926 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 WDCPQ9H6R7 721 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 CACNA2D2Q9NY47 1150 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 RRN3Q9NYV6 651 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 ADAMTS1Q9UHI8 967 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 STAP1Q9ULZ2 295 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 NENFQ9UMX5 172 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 SLC8A2Q9UPR5 921 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 LUC7L2Q9Y383 392 aaKnown RBP14.38□□□□□ -0.11
TPM1-230ENST00000561266 RAD54BQ9Y620 910 aa14.38□□□□□ -0.11
TPM1-230ENST00000561266 ZFHX2Q9C0A1 2572 aaPredicted RBP14.38□□□□□ -0.11
TPM1-230ENST00000561266 A0A1W2PQF6 199 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 CCP110O43303 1012 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 CBFA2T2O43439 604 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 ATG13O75143 517 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 SERPING1P05155 500 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 ABCB4P21439 1286 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 HOXA6P31267 233 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 HNRNPH3P31942 346 aaKnown RBP14.37□□□□□ -0.11
TPM1-230ENST00000561266 IL12RB1P42701 662 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 PTPN9P43378 593 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 ADKP55263 362 aaKnown RBP14.37□□□□□ -0.11
TPM1-230ENST00000561266 ZNF252P-AS1Q0IIN9 211 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 TBX2Q13207 712 aaPredicted RBP14.37□□□□□ -0.11
TPM1-230ENST00000561266 MAMLD1Q13495 774 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 FUT11Q495W5 492 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 ALFQ53S48 1182 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 MPP7Q5T2T1 576 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 SPECC1LQ69YQ0 1117 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 PLEKHA7Q6IQ23 1121 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 SARM1Q6SZW1 724 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 CHST9Q7L1S5 443 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 ANKS1BQ7Z6G8 1248 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 CARNMT1Q8N4J0 409 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 ARFGAP1Q8N6T3 406 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 SUMF1Q8NBK3 374 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 HJURPQ8NCD3 748 aaPredicted RBP14.37□□□□□ -0.11
TPM1-230ENST00000561266 FIBINQ8TAL6 211 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 CYB5D2Q8WUJ1 264 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 MCEEQ96PE7 176 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 ISCUQ9H1K1 167 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 SLC6A17Q9H1V8 727 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 ELOVL2Q9NXB9 296 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 THAP10Q9P2Z0 257 aaPredicted RBP14.37□□□□□ -0.11
TPM1-230ENST00000561266 GGA2Q9UJY4 613 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 VANGL2Q9ULK5 521 aa14.37□□□□□ -0.11
TPM1-230ENST00000561266 F5H5T6 163 aa14.36□□□□□ -0.11
TPM1-230ENST00000561266 FAM72CH0Y354 149 aa14.36□□□□□ -0.11
TPM1-230ENST00000561266 RTN2O75298 545 aa14.36□□□□□ -0.11
TPM1-230ENST00000561266 LUC7L3O95232 432 aaKnown RBP14.36□□□□□ -0.11
TPM1-230ENST00000561266 SLC2A3P11169 496 aa14.36□□□□□ -0.11
TPM1-230ENST00000561266 PABPC1P11940 636 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms