RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.8□□□□□ -1.8
USP8-217ENST00000561211 PNPLA1Q8N8W4 532 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 PCYOX1LQ8NBM8 494 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 TRAPPC12Q8WVT3 735 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 SARAFQ96BY9 339 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 HVCN1Q96D96 273 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 DAZAP1Q96EP5 407 aaKnown RBP3.8□□□□□ -1.8
USP8-217ENST00000561211 NAF1Q96HR8 494 aaKnown RBP3.8□□□□□ -1.8
USP8-217ENST00000561211 CDHR1Q96JP9 859 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 SEC62Q99442 399 aaKnown RBP3.8□□□□□ -1.8
USP8-217ENST00000561211 TREX2Q9BQ50 279 aaPredicted RBP3.8□□□□□ -1.8
USP8-217ENST00000561211 NUDT22Q9BRQ3 303 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 AP1M1Q9BXS5 423 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 SEZ6LQ9BYH1 1024 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 ZCWPW1Q9H0M4 648 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 PABPC3Q9H361 631 aaKnown RBP3.8□□□□□ -1.8
USP8-217ENST00000561211 TP63Q9H3D4 680 aaPredicted RBP3.8□□□□□ -1.8
USP8-217ENST00000561211 UBN1Q9NPG3 1134 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 WASH6PQ9NQA3 447 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 SNX15Q9NRS6 342 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 SMC4Q9NTJ3 1288 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 NKIRAS2Q9NYR9 191 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.8□□□□□ -1.8
USP8-217ENST00000561211 ZNF112Q9UJU3 913 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 CA14Q9ULX7 337 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 AFG3L2Q9Y4W6 797 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 WNT6Q9Y6F9 365 aa3.8□□□□□ -1.8
USP8-217ENST00000561211 COL11A2P13942 1736 aaPredicted RBP3.8□□□□□ -1.8
USP8-217ENST00000561211 C16orf96A6NNT2 1141 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 F5H0A9 414 aaPredicted RBP3.79□□□□□ -1.8
USP8-217ENST00000561211 CLIC1O00299 241 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 EIF3FO00303 357 aaPredicted RBP3.79□□□□□ -1.8
USP8-217ENST00000561211 JTBO76095 146 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 MT-CO3P00414 261 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 DGKQP52824 942 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 ARL4CP56559 192 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 PROK1P58294 105 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 DCAF7P61962 342 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 CCDC15Q0P6D6 951 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 FOXO1Q12778 655 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 CSHL1Q14406 222 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 MFSD13AQ14CX5 517 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 COLEC12Q5KU26 742 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 MTHFD1LQ6UB35 978 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 RFX8Q6ZV50 586 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 RRAGAQ7L523 313 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 KRT27Q7Z3Y8 459 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 RD3Q7Z3Z2 195 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 CHSY1Q86X52 802 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 NRSN1Q8IZ57 195 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 CHCHD4Q8N4Q1 142 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 LINC01465Q8N7H1 131 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 FAM71DQ8N9W8 422 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 ASB12Q8WXK4 309 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 HDAC2Q92769 488 aaKnown RBP3.79□□□□□ -1.8
USP8-217ENST00000561211 RILPL2Q969X0 211 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 EID2BQ96D98 161 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 RITA1Q96K30 269 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 SNX18Q96RF0 628 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 EIF3CQ99613 913 aaKnown RBP3.79□□□□□ -1.8
USP8-217ENST00000561211 CHCHD6Q9BRQ6 235 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 SLC26A6Q9BXS9 759 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 LMAN2LQ9H0V9 348 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 VPS16Q9H269 839 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 SEPSECSQ9HD40 501 aaKnown RBP3.79□□□□□ -1.8
USP8-217ENST00000561211 ITM2CQ9NQX7 267 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 GIMAP2Q9UG22 337 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 FZD4Q9ULV1 537 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 DAPP1Q9UN19 280 aa3.79□□□□□ -1.8
USP8-217ENST00000561211 POLR2AP24928 1970 aaKnown RBP3.79□□□□□ -1.8
USP8-217ENST00000561211 SPATA31A6Q5VVP1 1343 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 FAM170AA1A519 330 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 ACTL6BO94805 426 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 KAT7O95251 611 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 TBX18O95935 607 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 C1RP00736 705 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 HSP90AB1P08238 724 aaKnown RBP3.78□□□□□ -1.8
USP8-217ENST00000561211 ITGA2BP08514 1039 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 PSMA3P25788 255 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 CD38P28907 300 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 ELF1P32519 619 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 IGHMBP2P38935 993 aaKnown RBP3.78□□□□□ -1.8
USP8-217ENST00000561211 LIFRP42702 1097 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 JAK3P52333 1124 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 FAM3BP58499 235 aaPredicted RBP3.78□□□□□ -1.8
USP8-217ENST00000561211 TXNL4AP83876 142 aaKnown RBP3.78□□□□□ -1.8
USP8-217ENST00000561211 CFHR3Q02985 330 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 TAF5Q15542 800 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 MEA1Q16626 185 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 FAM187BQ17R55 369 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 PROSER3Q2NL68 480 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 SLC45A4Q5BKX6 768 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 KLHL17Q6TDP4 642 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 SERPINA13PQ6UXR4 307 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 C4orf50Q6ZRC1 276 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 ZNF804AQ7Z570 1209 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 TTC30AQ86WT1 665 aa3.78□□□□□ -1.8
USP8-217ENST00000561211 SLC44A2Q8IWA5 706 aaPredicted RBP3.78□□□□□ -1.8
USP8-217ENST00000561211 CCDC117Q8IWD4 279 aaPredicted RBP3.78□□□□□ -1.8
USP8-217ENST00000561211 NDUFAF2Q8N183 169 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms