RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 KDSRQ06136 332 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 INCA1Q0VD86 236 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 CCNIQ14094 377 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 OASLQ15646 514 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 MAP1SQ66K74 1059 aaPredicted RBP14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 GPR142Q7Z601 462 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 DPP9Q86TI2 863 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 ZNF410Q86VK4 478 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 GLIS1Q8NBF1 620 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 SLC26A7Q8TE54 656 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 DCAKDQ8WVC6 231 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 PYDC1Q8WXC3 89 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 NKD2Q969F2 451 aaPredicted RBP14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 STN1Q9H668 368 aaKnown RBP14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 DPP3Q9NY33 737 aa14.37□□□□□ -0.11
RABGGTA-220ENST00000560998 M0QYV0 167 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 MATN2O00339 956 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 HMGCRP04035 888 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 KRT7P08729 469 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 IL1R2P27930 398 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 PMLP29590 882 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 SLC5A2P31639 672 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 GRM5P41594 1212 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 GABRB2P47870 512 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 ARSEP51690 589 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 COG7P83436 770 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 HIF1AQ16665 826 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 SYCP2LQ5T4T6 812 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 PGM2L1Q6PCE3 622 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 RNF111Q6ZNA4 994 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 NT5DC4Q86YG4 428 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 OR6J1Q8NGC5 347 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 APBB2Q92870 758 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 MCRS1Q96EZ8 462 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 ABHD8Q96I13 439 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 HEXIM2Q96MH2 286 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 HAUS8Q9BT25 410 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 GRIP2Q9C0E4 1043 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 PCDH9Q9HC56 1237 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 EFR3BQ9Y2G0 817 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 CLUHO75153 1309 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 SF3B1O75533 1304 aaKnown RBP eCLIP14.36□□□□□ -0.118e-6■■■■■ 107
RABGGTA-220ENST00000560998 ARHGAP42A6NI28 874 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 ITGAVP06756 1048 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 ZSCAN5DPP0CG00 497 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 GPD2P43304 727 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 NDST1P52848 882 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 GPS1Q13098 491 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 TLR1Q15399 786 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 TAZQ16635 292 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 HADHQ16836 314 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 SLC25A41Q8N5S1 370 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 EMC1Q8N766 993 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 ACTRT2Q8TDY3 377 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 TTC17Q96AE7 1141 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 ADPGKQ9BRR6 497 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 SPATA7Q9P0W8 599 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 CLEC11AQ9Y240 323 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 HBS1LQ9Y450 684 aaKnown RBP14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 TRIP11Q15643 1979 aa14.36□□□□□ -0.11
RABGGTA-220ENST00000560998 RALGAPA2Q2PPJ7 1873 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 DCAF8L1A6NGE4 600 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 KLHL2O95198 593 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 ZBED1O96006 694 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 ETS1P14921 441 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 CDH2P19022 906 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 CYP3A5P20815 502 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 ACAT1P24752 427 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 DGKDQ16760 1214 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 LRRC36Q1X8D7 754 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 SMTNL2Q2TAL5 461 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 GRAMD1BQ3KR37 738 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 DCAF4L1Q3SXM0 396 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 CCDC33Q8N5R6 958 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 SLC35B2Q8TB61 432 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 PYROXD1Q8WU10 500 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 KIF12Q96FN5 646 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 DCUN1D1Q96GG9 259 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 FAM111AQ96PZ2 611 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 TINF2Q9BSI4 451 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 MRPL1Q9BYD6 325 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 ADAMTS10Q9H324 1103 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 FAM124BQ9H5Z6 455 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 INIPQ9NRY2 104 aa14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 TUBA8Q9NY65 449 aaPredicted RBP14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 RSL24D1Q9UHA3 163 aaKnown RBP14.35□□□□□ -0.11
RABGGTA-220ENST00000560998 CCDC162PA2VCL2 907 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 TRIM43BA6NCK2 446 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 TMEM247A6NEH6 219 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 C2orf71A6NGG8 1288 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 E7ESA3 106 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 H3BNX3 289 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 ALDH2P05091 517 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 RAG1P15918 1043 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 KDELR1P24390 212 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 CDK9P50750 372 aaKnown RBP14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 NUP107P57740 925 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 ZNF200P98182 395 aaPredicted RBP14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 WASHC5Q12768 1159 aa14.34□□□□□ -0.11
RABGGTA-220ENST00000560998 IQSEC1Q6DN90 963 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms