RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 SLC8A1P32418 973 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 KLF9Q13886 244 aaPredicted RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 CCDC38Q502W7 563 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 GLE1Q53GS7 698 aaKnown RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 EARS2Q5JPH6 523 aaKnown RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 ATPAF1Q5TC12 328 aaPredicted RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 ANO7Q6IWH7 933 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 NFRKBQ6P4R8 1299 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 ZNF474Q6S9Z5 364 aaPredicted RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 RBM44Q6ZP01 1051 aaKnown RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 SCAMP5Q8TAC9 235 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 COQ8BQ96D53 544 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 SIGLEC11Q96RL6 698 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 ARPC5LQ9BPX5 153 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 MECRQ9BV79 373 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 MAGEH1Q9H213 219 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 MLXIPQ9HAP2 919 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 ERVK-5Q9HDB9 667 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 KLHL13Q9P2N7 655 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 ZNF580Q9UK33 172 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 DAPP1Q9UN19 280 aa5.01□□□□□ -1.61
PSMA4-221ENST00000560842 HEMK1Q9Y5R4 338 aaPredicted RBP5.01□□□□□ -1.61
PSMA4-221ENST00000560842 MBD3L5A6NJ08 208 aaPredicted RBP5□□□□□ -1.61
PSMA4-221ENST00000560842 EFCAB8A8MWE9 144 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 KIF28PB7ZC32 967 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 PPP6R2O75170 966 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 ACTL6BO94805 426 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 SLC3A2P08195 630 aaKnown RBP5□□□□□ -1.61
PSMA4-221ENST00000560842 RFPL3SP0C7P2 107 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 GYS1P13807 737 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 FAM3BP58499 235 aaPredicted RBP5□□□□□ -1.61
PSMA4-221ENST00000560842 YPEL5P62699 121 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 AP2B1P63010 937 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 ETFDHQ16134 617 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 TBRG1Q3YBR2 411 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 RUSC1-AS1Q66K80 236 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 ERAP2Q6P179 960 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 SLC39A5Q6ZMH5 540 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 RINLQ6ZS11 566 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 RAB11FIP2Q7L804 512 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 C16orf71Q8IYS4 520 aaPredicted RBP5□□□□□ -1.61
PSMA4-221ENST00000560842 SRFBP1Q8NEF9 429 aaKnown RBP5□□□□□ -1.61
PSMA4-221ENST00000560842 REXO5Q96IC2 774 aaKnown RBP5□□□□□ -1.61
PSMA4-221ENST00000560842 TMEM120AQ9BXJ8 343 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 ARL8BQ9NVJ2 186 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 GRHPRQ9UBQ7 328 aa5□□□□□ -1.61
PSMA4-221ENST00000560842 INPPL1O15357 1258 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 USP12O75317 370 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 AKT1P31749 480 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 VPS41P49754 854 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 CCT4P50991 539 aaKnown RBP4.99□□□□□ -1.61
PSMA4-221ENST00000560842 TAS2R50P59544 299 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 GHRHRQ02643 423 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 SRSF1Q07955 248 aaKnown RBP eCLIP4.99□□□□□ -1.61
PSMA4-221ENST00000560842 SF3A3Q12874 501 aaKnown RBP eCLIP4.99□□□□□ -1.61
PSMA4-221ENST00000560842 TRIP6Q15654 476 aaKnown RBP4.99□□□□□ -1.61
PSMA4-221ENST00000560842 BTBD16Q32M84 506 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 TMEM88Q6PEY1 159 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 CCDC174Q6PII3 467 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 KLHL17Q6TDP4 642 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 NKAPQ8N5F7 415 aaKnown RBP4.99□□□□□ -1.61
PSMA4-221ENST00000560842 PIGOQ8TEQ8 1089 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 GPR78Q96P69 363 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 TMEM79Q9BSE2 394 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 ABHD16BQ9H3Z7 469 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 CCDC134Q9H6E4 229 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 PTPRHQ9HD43 1115 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 NRIP3Q9NQ35 241 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 LIN7CQ9NUP9 197 aaKnown RBP4.99□□□□□ -1.61
PSMA4-221ENST00000560842 LRFN1Q9P244 771 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 C19orf53Q9UNZ5 99 aaPredicted RBP4.99□□□□□ -1.61
PSMA4-221ENST00000560842 LZTS1Q9Y250 596 aa4.99□□□□□ -1.61
PSMA4-221ENST00000560842 EMSYQ7Z589 1322 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 C2CD4BA6NLJ0 364 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 IFRD1O00458 451 aaPredicted RBP4.98□□□□□ -1.61
PSMA4-221ENST00000560842 TLR2O60603 784 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 TCEA3O75764 348 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 FAM155BO75949 473 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 CTSAP10619 480 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 CST5P28325 142 aaPredicted RBP4.98□□□□□ -1.61
PSMA4-221ENST00000560842 SLC37A1P57057 533 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 RPS13P62277 151 aaKnown RBP4.98□□□□□ -1.61
PSMA4-221ENST00000560842 TRIM14Q14142 442 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 PDCD2Q16342 344 aaPredicted RBP4.98□□□□□ -1.61
PSMA4-221ENST00000560842 ZNF569Q5MCW4 686 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 C10orf25Q5T742 122 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 UEVLDQ8IX04 471 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 ADGRF3Q8IZF5 1079 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 OR52N4Q8NGI2 321 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 SLC2A12Q8TD20 617 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 ZFPM2Q8WW38 1151 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 SFXN1Q9H9B4 322 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 SRP68Q9UHB9 627 aaKnown RBP4.98□□□□□ -1.61
PSMA4-221ENST00000560842 SLC12A4Q9UP95 1085 aa4.98□□□□□ -1.61
PSMA4-221ENST00000560842 hCG_1642624A0A1W2PR95 340 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 SLC22A23A1A5C7 686 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 IPO5O00410 1097 aaKnown RBP4.97□□□□□ -1.61
PSMA4-221ENST00000560842 CNTN5O94779 1100 aa4.97□□□□□ -1.61
PSMA4-221ENST00000560842 TOP3BO95985 862 aaKnown RBP4.97□□□□□ -1.61
PSMA4-221ENST00000560842 ALDOAP04075 364 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms