RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 WFIKKN2Q8TEU8 576 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 DPH1Q9BZG8 443 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 TRIM4Q9C037 500 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 PNPLA8Q9NP80 782 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 ASCL3Q9NQ33 180 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 ABCB8Q9NUT2 735 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 SCML1Q9UN30 329 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 CLIC4Q9Y696 253 aa9.34□□□□□ -0.91
RABGGTA-217ENST00000560521 UNC13CQ8NB66 2214 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 SLC12A8A0AV02 714 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 LRRC72A6NJI9 287 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 K7ENP7 123 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 MID1O15344 667 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 EIF3DO15371 548 aaKnown RBP eCLIP9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 SDC3O75056 442 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 SIN3BO75182 1162 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 USP12O75317 370 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 DLDP09622 509 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 PABPC1P11940 636 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 CD70P32970 193 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 LSSP48449 732 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 CCR5P51681 352 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 CLDN10P78369 228 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 NCOA4Q13772 614 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 SPOPLQ6IQ16 392 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 INO80CQ6PI98 192 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 CCDC73Q6ZRK6 1079 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 AHI1Q8N157 1196 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 SLC25A45Q8N413 288 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 EXD3Q8N9H8 876 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 OR2T34Q8NGX1 318 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 PARD3BQ8TEW8 1205 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 TMA16Q96EY4 203 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 VCPIP1Q96JH7 1222 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 SERAC1Q96JX3 654 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 CDK5RAP1Q96SZ6 601 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 MARCH2Q9P0N8 246 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 GGA2Q9UJY4 613 aa9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 SRPRBQ9Y5M8 271 aaKnown RBP9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 UBR5O95071 2799 aaPredicted RBP9.33□□□□□ -0.92
RABGGTA-217ENST00000560521 ZFC3H1O60293 1989 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 LRRIQ3A6PVS8 624 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 TERTO14746 1132 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 RNASEH2AO75792 299 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 CLSTN1O94985 981 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 ATP5BP06576 529 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 POLR2EP19388 210 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 STAT6P42226 847 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 ASPAP45381 313 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 SGSHP51688 502 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 SKOR1P84550 965 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 ZNF211Q13398 564 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 TRIP4Q15650 581 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 CST6Q15828 149 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 SGSM1Q2NKQ1 1148 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 SLC45A4Q5BKX6 768 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 MMAAQ8IVH4 418 aaKnown RBP9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 NELFCDQ8IXH7 590 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 OXR1Q8N573 874 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 MFSD2AQ8NA29 543 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 PLD4Q96BZ4 506 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 LMLNQ96KR4 655 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 OMDQ99983 421 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 DUSP16Q9BY84 665 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 POLR1BQ9H9Y6 1135 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 ARHGAP20Q9P2F6 1191 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 STOML2Q9UJZ1 356 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 FZD4Q9ULV1 537 aa9.32□□□□□ -0.92
RABGGTA-217ENST00000560521 A0A1W2PNU3 283 aaPredicted RBP9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 LATO43561 262 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 STX6O43752 255 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 OPA1O60313 960 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 CSO75390 466 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 KIF20AO95235 890 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 GIMD1P0DJR0 217 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 SLC8A1P32418 973 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 TXLNAP40222 546 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 AP3M2P53677 418 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 ADPRHP54922 357 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 SNRPFP62306 86 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 PPP2CBP62714 309 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 PPP2CAP67775 309 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 DLG4P78352 724 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 DAB2P98082 770 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 INCA1Q0VD86 236 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 SFSWAPQ12872 951 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 NFATC3Q12968 1075 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 HNRNPA1L2Q32P51 320 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 LINC00303Q3SY05 128 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 C9orf64Q5T6V5 341 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 SND1Q7KZF4 910 aaKnown RBP eCLIP9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 BRAPQ7Z569 592 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 C12orf56Q8IXR9 622 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 AADATQ8N5Z0 425 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 PDILTQ8N807 584 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 OR14C36Q8NHC7 312 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 NDRG1Q92597 394 aaKnown RBP9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 TTC17Q96AE7 1141 aa9.31□□□□□ -0.92
RABGGTA-217ENST00000560521 MRGPRX3Q96LB0 322 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms