RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 TTBK2Q6IQ55 1244 aa19.65■□□□□ 0.74
SEMA4B-215ENST00000560089 COQ10BQ9H8M1 238 aa19.65■□□□□ 0.74
SEMA4B-215ENST00000560089 KDM3AQ9Y4C1 1321 aa19.64■□□□□ 0.74
SEMA4B-215ENST00000560089 BCL10O95999 233 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 CAPNS1P04632 268 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 MAPK4P31152 587 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 TTKP33981 857 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 CHRNEQ04844 493 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 PCSK7Q16549 785 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 TRIM71Q2Q1W2 868 aaKnown RBP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 FAM47CQ5HY64 1035 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 PRAMEF18Q5VWM3 479 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 ZNF786Q8N393 782 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 FAM47BQ8NA70 645 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 GABPB2Q8TAK5 448 aaPredicted RBP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 UIMC1Q96RL1 719 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 SERPINI1Q99574 410 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 NAP1L4Q99733 375 aaKnown RBP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 VPS33BQ9H267 617 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 GINM1Q9NU53 330 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 ANAPC7Q9UJX3 599 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 ANGPTL3Q9Y5C1 460 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 PRSS51A0A1B0GVH4 220 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 JRKO75564 520 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 PSMC2P35998 433 aaKnown RBP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 ARL1P40616 181 aaPredicted RBP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 ATXN3P54252 364 aaPredicted RBP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 PRAMEP78395 509 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 ALCAMQ13740 583 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 PTK2BQ14289 1009 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 RAB39AQ14964 217 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 DSG4Q86SJ6 1040 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 GALNT13Q8IUC8 556 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 PALM2Q8IXS6 379 aa19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 TMEM102Q8N9M5 508 aaPredicted RBP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 BHLHE22Q8NFJ8 381 aaPredicted RBP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 UBE2TQ9NPD8 197 aaPredicted RBP19.64■□□□□ 0.73
SEMA4B-215ENST00000560089 IGKV6D-41A0A0C4DH26 115 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 PLOD2O00469 737 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 ENTPD3O75355 529 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 TRIM49P0CI25 452 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 TRIM49CP0CI26 452 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 GRK2P25098 689 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 MSX2P35548 267 aaPredicted RBP19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 MYL7Q01449 175 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 ATAD3BQ5T9A4 648 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 RNASEH2BQ5TBB1 312 aaKnown RBP19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 BTLAQ7Z6A9 289 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 ZNF341Q9BYN7 854 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 GDAP2Q9NXN4 497 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 POTEB3A0JP26 581 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 CYB561D2O14569 222 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 CLPXO76031 633 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 MSL3P1P0C860 447 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 GZMAP12544 262 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 PRKCAP17252 672 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 NCF2P19878 526 aaPredicted RBP19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 CCNA2P20248 432 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 IDUAP35475 653 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 MAPK10P53779 464 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 DNASE1L3Q13609 305 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 CEP78Q5JTW2 689 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 POTEBQ6S5H4 581 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 SH2D5Q6ZV89 423 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 ZNF354CQ86Y25 554 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 FBXL18Q96ME1 805 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 SIRPGQ9P1W8 387 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 FZD1Q9UP38 647 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 SHOC2Q9UQ13 582 aa19.63■□□□□ 0.73
SEMA4B-215ENST00000560089 INHBAP08476 426 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 PHC1P78364 1004 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 IKBKEQ14164 716 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 ABCB5Q2M3G0 1257 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 ZCCHC23Q6ZST2 131 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 AKAP14Q86UN6 197 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 OSTM1Q86WC4 334 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 SEMA6AQ9H2E6 1030 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 H0YJX3 145 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 TNPO2O14787 897 aaKnown RBP19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 SNNO75324 88 aaPredicted RBP19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 XRCC1P18887 633 aaPredicted RBP19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 ENPP1P22413 925 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 L1CAMP32004 1257 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 THOP1P52888 689 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 LDLRAP1Q5SW96 308 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 PDPK2PQ6A1A2 396 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 TTC33Q6PID6 262 aaPredicted RBP19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 PIGSQ96S52 555 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 SYT17Q9BSW7 474 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 B3GNT4Q9C0J1 378 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 GLT8D2Q9H1C3 349 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 CCDC177Q9NQR7 707 aaPredicted RBP19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 THAP1Q9NVV9 213 aa19.62■□□□□ 0.73
SEMA4B-215ENST00000560089 TAF4O00268 1085 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 SGPL1O95470 568 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 COX4I1P13073 169 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 MTM1Q13496 603 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 DPYSQ14117 519 aa19.61■□□□□ 0.73
SEMA4B-215ENST00000560089 ZNF846Q147U1 533 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms