RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CASP1P29466 404 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 PDK2Q15119 407 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNHIT3Q15649 155 aaPredicted RBP14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 PKN1Q16512 942 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 SAMD4BQ5PRF9 694 aaKnown RBP14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 USPL1Q5W0Q7 1092 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 MAGEC3Q8TD91 643 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 CITED4Q96RK1 184 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 RNF146Q9NTX7 359 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF806P0C7X5 589 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 CYP2C8P10632 490 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 RBP3P10745 1247 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 CPA3P15088 417 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 PNPLA4P41247 253 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 SMIM11AP58511 58 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 INTS11Q5TA45 600 aaKnown RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 FMR1NBQ8N0W7 255 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF668Q96K58 619 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 TMEM8AQ9HCN3 771 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 IKZF3Q9UKT9 509 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 MAGEB16A2A368 324 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 EGFRP00533 1210 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ACAP1Q15027 740 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 SMU1Q2TAY7 513 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 RNF19BQ6ZMZ0 732 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ADGRF4Q8IZF3 695 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 FSTL5Q8N475 847 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ASB2Q96Q27 587 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 TBC1D13Q9NVG8 400 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 TBC1D30Q9Y2I9 924 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 RCAN1P53805 252 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 SNRNP35Q16560 246 aaKnown RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF248Q8NDW4 579 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 SUCOQ9UBS9 1254 aaKnown RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 A0A1W2PQJ5 194 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 PLOD2O00469 737 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 TEX33O43247 280 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 MSR1P21757 451 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 MAPK9P45984 424 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZFP69Q49AA0 526 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 PDCD4Q53EL6 469 aaKnown RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 AXIN1O15169 862 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ADSLP30566 484 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 S100A12P80511 92 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 DGCR6Q14129 220 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 SPIDRQ14159 915 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 FAM187BQ17R55 369 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 KCNN2Q9H2S1 579 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 GPAMQ9HCL2 828 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 HBS1LQ9Y450 684 aaKnown RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZBTB22O15209 634 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 FOSL1P15407 271 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 HKDC1Q2TB90 917 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 RAET1EQ8TD07 263 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF354BQ96LW1 612 aa14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 CDK5RAP1Q96SZ6 601 aaKnown RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 CELF4Q9BZC1 486 aaKnown RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF214Q9UL59 606 aaPredicted RBP14.13□□□□□ -0.15
CSPG4P12-202ENST00000559989 KIAA0586Q9BVV6 1533 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 GARTP22102 1010 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 CRABP2P29373 138 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ADSSP30520 456 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 DENND6BQ8NEG7 585 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 SPACA7Q96KW9 195 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 GRIP2Q9C0E4 1043 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 OSBPL3Q9H4L5 887 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 GNPTGQ9UJJ9 305 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 TMCO1Q9UM00 188 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 TRIM17Q9Y577 477 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 NFKB1P19838 968 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 NTSP30990 170 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 OR1G1P47890 313 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 SH3RF3Q8TEJ3 882 aaPredicted RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 AIFM3Q96NN9 605 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ADGBQ8N7X0 1667 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 GHRP10912 638 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ITGA2P17301 1181 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 MAPK10P53779 464 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 IL18R1Q13478 541 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 GPAT2Q6NUI2 795 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF613Q6PF04 617 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 KBTBD2Q8IY47 623 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ELOA2Q8IYF1 753 aaPredicted RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 TDRD1Q9BXT4 1180 aaKnown RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 USP17L10C9JJH3 530 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 SEC22BO75396 215 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 SRGNP10124 158 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 H2AFXP16104 143 aaPredicted RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 EPHB2P29323 1055 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ACOT2P49753 483 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 NEK3P51956 506 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 ZNF621Q6ZSS3 439 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 MYCBPAPQ8TBZ2 947 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 PABPC3Q9H361 631 aaKnown RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 INTS7Q9NVH2 962 aaKnown RBP14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 RAPGEFL1Q9UHV5 662 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 TRIM64A6NGJ6 449 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 RLN1P04808 185 aa14.12□□□□□ -0.15
CSPG4P12-202ENST00000559989 CYP2E1P05181 493 aaPredicted RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms