RNA–Protein interactions for RNA: ENST00000559771.5

USP3-215, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-215ENST00000559771 HPSEQ9Y251 543 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 SH3BP1Q9Y3L3 701 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 RAD54BQ9Y620 910 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 USP3Q9Y6I4 520 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 PCNX2A6NKB5 2137 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 PLXNB3Q9ULL4 1909 aa6.11□□□□□ -1.43
USP3-215ENST00000559771 CELSR3Q9NYQ7 3312 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 LOC400499M0QZD8 3231 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 CKAP5Q14008 2032 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 A0A1W2PQH9 124 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 FAM221BA6H8Z2 402 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 SRRM3A6NNA2 597 aaPredicted RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 NEDD8-MDP1E9PL57 170 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 TAF4O00268 1085 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 PDXKO00764 312 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 IKBKBO14920 756 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 PHACTR2O75167 634 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 CILPO75339 1184 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 STC2O76061 302 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 PENKP01210 267 aaPredicted RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 HLA-DRAP01903 254 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 NR3C1P04150 777 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 RPN1P04843 607 aaKnown RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 SERPINF2P08697 491 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 TRIM49P0CI25 452 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 TRIM49CP0CI26 452 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 ZSCAN22P10073 491 aaPredicted RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 ACO1P21399 889 aaKnown RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 ADORA2BP29275 332 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 NTSR1P30989 418 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 HOXD12P35452 270 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 KIF11P52732 1056 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 AP3M2P53677 418 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 BNC1Q01954 994 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 RPL6Q02878 288 aaKnown RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 DNM1Q05193 864 aaKnown RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 ZNF33AQ06730 810 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 SFSWAPQ12872 951 aaKnown RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 LMAN2Q12907 356 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 ENPP2Q13822 863 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 SGSM1Q2NKQ1 1148 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 FYB2Q5VWT5 728 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 GRAMD4Q6IC98 578 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 KLHDC10Q6PID8 442 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 TPGS1Q6ZTW0 290 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 BHLHA9Q7RTU4 235 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 UNC93AQ86WB7 457 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 ZNF276Q8N554 614 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 TAS1R2Q8TE23 839 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 TAF4BQ92750 862 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 SEMA4DQ92854 862 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 ZNF419Q96HQ0 510 aaPredicted RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 SPACA7Q96KW9 195 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 CAMK1GQ96NX5 476 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 BBS2Q9BXC9 721 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 FBXO44Q9H4M3 255 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 DNAJC17Q9NVM6 304 aaKnown RBP6.1□□□□□ -1.43
USP3-215ENST00000559771 CACNA2D2Q9NY47 1150 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 PLK2Q9NYY3 685 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 SLC6A14Q9UN76 642 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 CYP8B1Q9UNU6 501 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 TRAF3IP3Q9Y228 551 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 ZDHHC9Q9Y397 364 aa6.1□□□□□ -1.43
USP3-215ENST00000559771 PKD1L2Q7Z442 2459 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 PTPRBP23467 1997 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 GON4LQ3T8J9 2241 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 ATP8B3O60423 1300 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 FAM237AA0A1B0GTK4 181 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 A0A1B0GVL5 298 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 KCNJ18B7U540 433 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 GFRA2O00451 464 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 MAPK13O15264 365 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 AP5Z1O43299 807 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 CFIP05156 583 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 FBXO45P0C2W1 286 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 FAM200BP0CF97 657 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 RARGP13631 454 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 PFKFB1P16118 471 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 MAOBP27338 520 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 ATP5C1P36542 298 aaKnown RBP6.09□□□□□ -1.43
USP3-215ENST00000559771 ME1P48163 572 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 GCLMP48507 274 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 MFAP3P55082 362 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 TLR1Q15399 786 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 NFIL3Q16649 462 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 GEN1Q17RS7 908 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 DUOXA1Q1HG43 343 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 FUT11Q495W5 492 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 TMEM259Q4ZIN3 620 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 ZCWPW2Q504Y3 356 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 RAB41Q5JT25 222 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 BTBD8Q5XKL5 378 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 TMEM215Q68D42 235 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 CCDC186Q7Z3E2 898 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 TRMT11Q7Z4G4 463 aaKnown RBP6.09□□□□□ -1.43
USP3-215ENST00000559771 RAB44Q7Z6P3 723 aaPredicted RBP6.09□□□□□ -1.43
USP3-215ENST00000559771 CHPFQ8IZ52 775 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 MINDY1Q8N5J2 469 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 TRIML1Q8N9V2 468 aa6.09□□□□□ -1.43
USP3-215ENST00000559771 GOLGA5Q8TBA6 731 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms