RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 CCDC144NLQ6NUI1 221 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 ACSM6Q6P461 480 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 SRLQ86TD4 932 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 ZNF354CQ86Y25 554 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 ACRBPQ8NEB7 543 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 VPS37AQ8NEZ2 397 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 ASB12Q8WXK4 309 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 SCLT1Q96NL6 688 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 NAA15Q9BXJ9 866 aaKnown RBP4.26□□□□□ -1.73
SPG11-218ENST00000559754 PCDHAC1Q9H158 963 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 MLXIPLQ9NP71 852 aa4.26□□□□□ -1.73
SPG11-218ENST00000559754 ZC3H11AO75152 810 aaKnown RBP eCLIP4.25□□□□□ -1.73
SPG11-218ENST00000559754 ALPLP05186 524 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 AKR1A1P14550 325 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 EGR1P18146 543 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 SOX2P48431 317 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 ZNF84P51523 738 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 NSUN2Q08J23 767 aaKnown RBP eCLIP4.25□□□□□ -1.73
SPG11-218ENST00000559754 GAB1Q13480 694 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 ELF2Q15723 593 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 MIDNQ504T8 468 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 RAP1GAP2Q684P5 730 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 CRELD2Q6UXH1 353 aaPredicted RBP4.25□□□□□ -1.73
SPG11-218ENST00000559754 KYAT3Q6YP21 454 aaKnown RBP4.25□□□□□ -1.73
SPG11-218ENST00000559754 KRBA2Q6ZNG9 492 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 KRT27Q7Z3Y8 459 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 RFX6Q8HWS3 928 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 TMTC2Q8N394 836 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 TXLNBQ8N3L3 684 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 HTATIP2Q9BUP3 242 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 GATA5Q9BWX5 397 aaPredicted RBP4.25□□□□□ -1.73
SPG11-218ENST00000559754 ZHX3Q9H4I2 956 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 CDCP1Q9H5V8 836 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 MOV10Q9HCE1 1003 aaKnown RBP4.25□□□□□ -1.73
SPG11-218ENST00000559754 TMEM8AQ9HCN3 771 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 ZBTB40Q9NUA8 1239 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 ZNF580Q9UK33 172 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 AGO2Q9UKV8 859 aaKnown RBP4.25□□□□□ -1.73
SPG11-218ENST00000559754 RPS6KL1Q9Y6S9 549 aa4.25□□□□□ -1.73
SPG11-218ENST00000559754 CCDC187A0A096LP49 1063 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 CTIFO43310 598 aaKnown RBP4.24□□□□□ -1.73
SPG11-218ENST00000559754 PIP5K1CO60331 668 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 UGDHO60701 494 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 SLC5A1P13866 664 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 TBXAS1P24557 533 aaPredicted RBP4.24□□□□□ -1.73
SPG11-218ENST00000559754 GABRB3P28472 473 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 TM4SF4P48230 202 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 PRIM2P49643 509 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 THBS3P49746 956 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 AGTR2P50052 363 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 SEMA3AQ14563 771 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 DLGAP5Q15398 846 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 MAPKAPK3Q16644 382 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 ARL13BQ3SXY8 428 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 ANXA2RQ3ZCQ2 193 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 DHRS13Q6UX07 377 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 DPP9Q86TI2 863 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 LAS2Q8IYD9 372 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 FAM47BQ8NA70 645 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 PARD3BQ8TEW8 1205 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 BRI3BPQ8WY22 251 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 SLC25A28Q96A46 364 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 FBXO28Q9NVF7 368 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 WWOXQ9NZC7 414 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 PGAP2Q9UHJ9 254 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 CA14Q9ULX7 337 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 MAN2B2Q9Y2E5 1009 aa4.24□□□□□ -1.73
SPG11-218ENST00000559754 TRBV5-3A0A0A0MS03 114 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 ZNF814B7Z6K7 855 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 NBNO60934 754 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 SRGAP2BP0DMP2 458 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 PECAM1P16284 738 aaPredicted RBP4.23□□□□□ -1.73
SPG11-218ENST00000559754 CDC25AP30304 524 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 STAT6P42226 847 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 CASP2P42575 452 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 CCT5P48643 541 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 HTR6P50406 440 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 KRTAP10-9P60411 292 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 BTKQ06187 659 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 DMWDQ09019 674 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 BIRC3Q13489 604 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 CSHL1Q14406 222 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 INPP5JQ15735 1006 aaPredicted RBP4.23□□□□□ -1.73
SPG11-218ENST00000559754 PRTGQ2VWP7 1150 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 KLHL22Q53GT1 634 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 ARHGAP15Q53QZ3 475 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 LIPMQ5VYY2 423 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 RUSC1-AS1Q66K80 236 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 ISM2Q6H9L7 571 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 XRRA1Q6P2D8 792 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 PIK3AP1Q6ZUJ8 805 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 RFX8Q6ZV50 586 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 B4GALNT4Q76KP1 1039 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 TRAPPC11Q7Z392 1133 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 MYLK4Q86YV6 388 aaPredicted RBP4.23□□□□□ -1.73
SPG11-218ENST00000559754 RHPN2Q8IUC4 686 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 NKAPQ8N5F7 415 aaKnown RBP4.23□□□□□ -1.73
SPG11-218ENST00000559754 SRFBP1Q8NEF9 429 aaKnown RBP4.23□□□□□ -1.73
SPG11-218ENST00000559754 ZFPM2Q8WW38 1151 aa4.23□□□□□ -1.73
SPG11-218ENST00000559754 TBCBQ99426 244 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms