RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 OSBPL2Q9H1P3 480 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 TBC1D17Q9HA65 648 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 VANGL2Q9ULK5 521 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 USP18Q9UMW8 372 aa22.41■■□□□ 1.18
SNX1-206ENST00000559389 TYW5A2RUC4 315 aaKnown RBP22.4■■□□□ 1.18
SNX1-206ENST00000559389 TMEM221A6NGB7 291 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 M0R296 226 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 PRPSAP2O60256 369 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 TCF4P15884 667 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 ARHGAP25P42331 645 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 SLC25A11Q02978 314 aaKnown RBP22.4■■□□□ 1.18
SNX1-206ENST00000559389 MESDQ14696 234 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 C5orf22Q49AR2 442 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 RABGAP1LQ5R372 815 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 TTC39BQ5VTQ0 682 aaPredicted RBP22.4■■□□□ 1.18
SNX1-206ENST00000559389 ZNF852Q6ZMS4 543 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 C14orf80Q86SX3 495 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 CPNE8Q86YQ8 564 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 P2RY13Q9BPV8 354 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 KCNF1Q9H3M0 494 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 EPHX3Q9H6B9 360 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 PCSK1NQ9UHG2 260 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 SALL4Q9UJQ4 1053 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 MYOFQ9NZM1 2061 aa22.4■■□□□ 1.18
SNX1-206ENST00000559389 MIA3Q5JRA6 1907 aa22.39■■□□□ 1.18
SNX1-206ENST00000559389 TECTAO75443 2155 aa22.39■■□□□ 1.18
SNX1-206ENST00000559389 A0A0U1RQJ8 604 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 TMEM110-MUSTN1A8MSY1 372 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.39■■□□□ 1.17
SNX1-206ENST00000559389 E9PAM4 449 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 TBL1XO60907 577 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 TULP3O75386 442 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 IL1R2P27930 398 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 NOP2P46087 812 aaKnown RBP22.39■■□□□ 1.17
SNX1-206ENST00000559389 IRAK1P51617 712 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 TMEM196Q5HYL7 178 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 CFAP52Q8N1V2 620 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 PHTF2Q8N3S3 785 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 NAT16Q8N8M0 369 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 ATRIPQ8WXE1 791 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 CD101Q93033 1021 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 IGSF8Q969P0 613 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 RPRD1AQ96P16 312 aaPredicted RBP22.39■■□□□ 1.17
SNX1-206ENST00000559389 XPO6Q96QU8 1125 aaKnown RBP22.39■■□□□ 1.17
SNX1-206ENST00000559389 LTB4R2Q9NPC1 389 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 DNAJC17Q9NVM6 304 aaKnown RBP22.39■■□□□ 1.17
SNX1-206ENST00000559389 FBXO10Q9UK96 956 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 AP4E1Q9UPM8 1137 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 NEU3Q9UQ49 428 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 TTC28Q96AY4 2481 aa22.39■■□□□ 1.17
SNX1-206ENST00000559389 IGLV3-10A0A075B6K4 115 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 KANSL1LA0AUZ9 987 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 CD72P21854 359 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 SLC6A11P48066 632 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 KIF5AQ12840 1032 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 SEMA3BQ13214 749 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 PON2Q15165 354 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 CWF19L1Q69YN2 538 aaKnown RBP22.38■■□□□ 1.17
SNX1-206ENST00000559389 C11orf63Q6NUN7 778 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 CIR1Q86X95 450 aaPredicted RBP22.38■■□□□ 1.17
SNX1-206ENST00000559389 PSTKQ8IV42 348 aaKnown RBP22.38■■□□□ 1.17
SNX1-206ENST00000559389 EXOC4Q96A65 974 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 SLC2A11Q9BYW1 496 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 MAGEB5Q9BZ81 275 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 GPATCH2LQ9NWQ4 482 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 TRIM10Q9UDY6 481 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 OR12D3Q9UGF7 316 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 CLEC4EQ9ULY5 219 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 MRPS17Q9Y2R5 130 aaKnown RBP22.38■■□□□ 1.17
SNX1-206ENST00000559389 DUSP10Q9Y6W6 482 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 NCOR1O75376 2440 aa22.38■■□□□ 1.17
SNX1-206ENST00000559389 A0A1B0GVM2 712 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 TCAF2A6NFQ2 919 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 FAM72CH0Y354 149 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 BUB1BO60566 1050 aaPredicted RBP22.37■■□□□ 1.17
SNX1-206ENST00000559389 LUC7L3O95232 432 aaKnown RBP22.37■■□□□ 1.17
SNX1-206ENST00000559389 PDGFBP01127 241 aaPredicted RBP22.37■■□□□ 1.17
SNX1-206ENST00000559389 CCDC175P0C221 793 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 TARSP26639 723 aaKnown RBP22.37■■□□□ 1.17
SNX1-206ENST00000559389 L1CAMP32004 1257 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 KDSRQ06136 332 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 MESP2Q0VG99 397 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 ERMARDQ5T6L9 678 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 FAM72AQ5TYM5 149 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 TXNRD3NBQ6F5E7 133 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 GRAMD4Q6IC98 578 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 FAM72DQ6L9T8 149 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 FSTL4Q6MZW2 842 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 LRRC31Q6UY01 552 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 FAM72BQ86X60 149 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 SUGP1Q8IWZ8 645 aaKnown RBP22.37■■□□□ 1.17
SNX1-206ENST00000559389 ZNF687Q8N1G0 1237 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 PYROXD2Q8N2H3 581 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 TPCN2Q8NHX9 752 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 TEKT4Q8WW24 435 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 CALR3Q96L12 384 aaKnown RBP22.37■■□□□ 1.17
SNX1-206ENST00000559389 PNKPQ96T60 521 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 FOXQ1Q9C009 403 aa22.37■■□□□ 1.17
SNX1-206ENST00000559389 FBRSL1Q9HCM7 1045 aaKnown RBP22.37■■□□□ 1.17
SNX1-206ENST00000559389 STIM2Q9P246 746 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms