RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 SKIV2L2P42285 1042 aaKnown RBP11.61□□□□□ -0.55
CLPX-204ENST00000559152 HTRA3P83110 453 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 ZNF33AQ06730 810 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 BNIP1Q12981 228 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 BSPRYQ5W0U4 402 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 CGB2Q6NT52 195 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 SH2D5Q6ZV89 423 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 GPRIN1Q7Z2K8 1008 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 ECHDC2Q86YB7 292 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 LRRN4Q8WUT4 740 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 SERAC1Q96JX3 654 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 SUSD3Q96L08 255 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 PAAF1Q9BRP4 392 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 MOCS1Q9NZB8 636 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 GRID1Q9ULK0 1009 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 MFHAS1Q9Y4C4 1052 aa11.61□□□□□ -0.55
CLPX-204ENST00000559152 GOLGA8RI6L899 631 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 DHRS4L1P0CG22 281 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 BDNFP23560 247 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 HOXD10P28358 340 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 CCND3P30281 292 aaPredicted RBP11.6□□□□□ -0.55
CLPX-204ENST00000559152 CACNA2D1P54289 1103 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 COG7P83436 770 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 PPIDQ08752 370 aaKnown RBP11.6□□□□□ -0.55
CLPX-204ENST00000559152 WASHC5Q12768 1159 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 SF3A3Q12874 501 aaKnown RBP eCLIP11.6□□□□□ -0.55
CLPX-204ENST00000559152 FAM133BQ5BKY9 247 aaKnown RBP11.6□□□□□ -0.55
CLPX-204ENST00000559152 SPDYAQ5MJ70 313 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 FBXW10Q5XX13 1052 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 ITPRIPL1Q6GPH6 555 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 CASC4Q6P4E1 433 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 GLB1LQ6UWU2 654 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 TIFABQ6ZNK6 161 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 PID1Q7Z2X4 250 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 PDCD7Q8N8D1 485 aaKnown RBP11.6□□□□□ -0.55
CLPX-204ENST00000559152 ADAM32Q8TC27 787 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 DEPDC1BQ8WUY9 529 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 HDAC11Q96DB2 347 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 PKMYT1Q99640 499 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 TKTL2Q9H0I9 626 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 OSBPL2Q9H1P3 480 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 SLC40A1Q9NP59 571 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 SEPT10Q9P0V9 454 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 KLHL8Q9P2G9 620 aaPredicted RBP11.6□□□□□ -0.55
CLPX-204ENST00000559152 OR12D3Q9UGF7 316 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 INPP5FQ9Y2H2 1132 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 PIAS1O75925 651 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 UBOX5O94941 541 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 IL1BP01584 269 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 NEFHP12036 1026 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 BRCC3P46736 316 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 TRIM32Q13049 653 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 SPRED3Q2MJR0 410 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 TRIM71Q2Q1W2 868 aaKnown RBP11.6□□□□□ -0.55
CLPX-204ENST00000559152 BRMS1LQ5PSV4 323 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 MARK2Q7KZI7 788 aaKnown RBP11.6□□□□□ -0.55
CLPX-204ENST00000559152 BHLHA9Q7RTU4 235 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 ZNF598Q86UK7 904 aaKnown RBP11.6□□□□□ -0.55
CLPX-204ENST00000559152 SPATA2LQ8IUW3 424 aaPredicted RBP11.6□□□□□ -0.55
CLPX-204ENST00000559152 ZNF567Q8N184 647 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 CCDC33Q8N5R6 958 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 RNF34Q969K3 372 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 LRRC37BQ96QE4 947 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 TMPRSS4Q9NRS4 437 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 RGS18Q9NS28 235 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 ABCC13Q9NSE7 274 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 KLC4Q9NSK0 619 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 KANSL3Q9P2N6 904 aa11.6□□□□□ -0.55
CLPX-204ENST00000559152 MOXD2PA6NHM9 499 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 CXorf49A8MYA2 514 aaPredicted RBP11.59□□□□□ -0.55
CLPX-204ENST00000559152 KLF11O14901 512 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 PSMD3O43242 534 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 TGDSO95455 350 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 POLBP06746 335 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 PSMB4P28070 264 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 HNRNPH1P31943 449 aaKnown RBP11.59□□□□□ -0.55
CLPX-204ENST00000559152 CCNFP41002 786 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 ETV4P43268 484 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 SP3Q02447 781 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 YWHAHQ04917 246 aaPredicted RBP11.59□□□□□ -0.55
CLPX-204ENST00000559152 GALNT2Q10471 571 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 FITM2Q8N6M3 262 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 URGCPQ8TCY9 931 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 ACMSDQ8TDX5 336 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 EDEM1Q92611 657 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 GLT1D1Q96MS3 346 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 KLF6Q99612 283 aaPredicted RBP11.59□□□□□ -0.55
CLPX-204ENST00000559152 PLAC1Q9HBJ0 212 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 TMEM30AQ9NV96 361 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 SLC17A7Q9P2U7 560 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 MAGEB16A2A368 324 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 WDR27A2RRH5 827 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 TMEM88BA6NKF7 163 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 FAM72CH0Y354 149 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 I3L4J1 428 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 DNAJB2P25686 324 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 PTPN3P26045 913 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 EPHB2P29323 1055 aa11.59□□□□□ -0.55
CLPX-204ENST00000559152 GRIA1P42261 906 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms