RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 E2F5Q15329 346 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 PTPRNQ16849 979 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 MS4A13Q5J8X5 152 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 MPP7Q5T2T1 576 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 DAB2IPQ5VWQ8 1189 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 OR6B2Q6IFH4 312 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 PSAPL1Q6NUJ1 521 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 MMS22LQ6ZRQ5 1243 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 FAM183BPQ6ZVS7 135 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 FAM124AQ86V42 546 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 CCDC117Q8IWD4 279 aaPredicted RBP12.36□□□□□ -0.43
HERC1-202ENST00000558324 LGI2Q8N0V4 545 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 DEFB106AQ8N104 65 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 AZIN2Q96A70 460 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 NOX5Q96PH1 765 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 GTPBP2Q9BX10 602 aaKnown RBP12.36□□□□□ -0.43
HERC1-202ENST00000558324 LSM14BQ9BX40 385 aaKnown RBP12.36□□□□□ -0.43
HERC1-202ENST00000558324 GPR174Q9BXC1 333 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 PDCL3Q9H2J4 239 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 DDIT4Q9NX09 232 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 PCDHGC3Q9UN70 934 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 NFE2L3Q9Y4A8 694 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 CEP83Q9Y592 693 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 PLXND1Q9Y4D7 1925 aa12.36□□□□□ -0.43
HERC1-202ENST00000558324 TNRC6BQ9UPQ9 1833 aaKnown RBP12.36□□□□□ -0.43
HERC1-202ENST00000558324 MUC22E2RYF6 1773 aaPredicted RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 NUP205Q92621 2012 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 KCNK5O95279 499 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 ATP5BP06576 529 aaKnown RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 DLDP09622 509 aaKnown RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 TACR2P21452 398 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 MAOBP27338 520 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 DPP6P42658 865 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 NOVA1P51513 510 aaKnown RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 TPMTP51580 245 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 ATXN3P54252 364 aaPredicted RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 CDK17Q00537 523 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 KCNMA1Q12791 1236 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 DRAP1Q14919 205 aaPredicted RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 DUOXA1Q1HG43 343 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 PTPN20Q4JDL3 420 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 TCP11X2Q5H9J9 407 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 FSCBQ5H9T9 825 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 TAF3Q5VWG9 929 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 PEAR1Q5VY43 1037 aaPredicted RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 C11orf57Q6ZUT1 292 aaPredicted RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 BEND5Q7L4P6 421 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 KIAA0907Q7Z7F0 614 aaPredicted RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 CIR1Q86X95 450 aaPredicted RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 OR2T3Q8NH03 318 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 GPT2Q8TD30 523 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 RNF34Q969K3 372 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 GBP4Q96PP9 640 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 LHX5Q9H2C1 402 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 TMEM245Q9H330 911 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 MTG2Q9H4K7 406 aa12.35□□□□□ -0.43
HERC1-202ENST00000558324 USP36Q9P275 1121 aaKnown RBP12.35□□□□□ -0.43
HERC1-202ENST00000558324 F5H5T6 163 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 H0Y626 953 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 GIPC1O14908 333 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 HSF2BPO75031 334 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 LUC7L3O95232 432 aaKnown RBP12.34□□□□□ -0.43
HERC1-202ENST00000558324 IGLV3-25P01717 112 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 HOXD12P35452 270 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 GGCXP38435 758 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 CSKP41240 450 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 GFPT1Q06210 699 aaPredicted RBP12.34□□□□□ -0.43
HERC1-202ENST00000558324 NME3Q13232 169 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 CAMK2GQ13555 558 aaPredicted RBP12.34□□□□□ -0.43
HERC1-202ENST00000558324 EFHC1Q5JVL4 640 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 SYCP2LQ5T4T6 812 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 N4BP2L1Q5TBK1 243 aaPredicted RBP12.34□□□□□ -0.43
HERC1-202ENST00000558324 SH3PXD2AQ5TCZ1 1133 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 KLHDC7AQ5VTJ3 777 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 DPY19L2P1Q6NXN4 242 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 SLC23A3Q6PIS1 610 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 OLFML1Q6UWY5 402 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 CLEC17AQ6ZS10 378 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 FAM71AQ8IYT1 594 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 ATP6V0D2Q8N8Y2 350 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 ZNF557Q8N988 423 aaPredicted RBP12.34□□□□□ -0.43
HERC1-202ENST00000558324 OR2I1PQ8NGU4 316 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 FIBINQ8TAL6 211 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 CEP76Q8TAP6 659 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 FOXJ1Q92949 421 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 ZNF419Q96HQ0 510 aaPredicted RBP12.34□□□□□ -0.43
HERC1-202ENST00000558324 BTN2A3PQ96KV6 586 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 SLC2A13Q96QE2 648 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 IRX2Q9BZI1 471 aaPredicted RBP12.34□□□□□ -0.43
HERC1-202ENST00000558324 MIR1-1HGQ9H1L0 117 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 VPS16Q9H269 839 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 PRSS16Q9NQE7 514 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 ITM2CQ9NQX7 267 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 WSB2Q9NYS7 404 aaPredicted RBP12.34□□□□□ -0.43
HERC1-202ENST00000558324 INTS6Q9UL03 887 aaKnown RBP12.34□□□□□ -0.43
HERC1-202ENST00000558324 SLC6A14Q9UN76 642 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 NCOR2Q9Y618 2525 aa12.34□□□□□ -0.43
HERC1-202ENST00000558324 KCNU1A8MYU2 1149 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 GLI1P08151 1106 aa12.33□□□□□ -0.44
HERC1-202ENST00000558324 SERPINF2P08697 491 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms