RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 OR6C65A6NJZ3 312 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 PLA2G6O60733 806 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 KCNK2O95069 426 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TP53P04637 393 aaPredicted RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 RPL10P27635 214 aaKnown RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 HSPA13P48723 471 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 PMS2P3Q13401 168 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 GALNT3Q14435 633 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 HSF5Q4G112 596 aaPredicted RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 LDLRAP1Q5SW96 308 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 RSBN1Q5VWQ0 802 aaPredicted RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 PRR23BQ6ZRT6 265 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 DIS3L2Q8IYB7 885 aaKnown RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 SLC6A17Q9H1V8 727 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 CAB39Q9Y376 341 aaPredicted RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 FLT4P35916 1363 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TET3O43151 1660 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 LRRIQ4A6NIV6 560 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 GRM8O00222 908 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 CTDSP2O14595 271 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 THAP12O43422 761 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TYROBPO43914 113 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 GOT2P00505 430 aaKnown RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 HOXC9P31274 260 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 IL6STP40189 918 aaPredicted RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 ABCB5Q2M3G0 1257 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 ESCO2Q56NI9 601 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 YIF1BQ5BJH7 314 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 SLC9A4Q6AI14 798 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 RMND5BQ96G75 393 aaPredicted RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 MRM3Q9HC36 420 aaKnown RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TOR4AQ9NXH8 423 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 POMPQ9Y244 141 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 ATP5J2-PTCD1G3V325 749 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 MFN2O95140 757 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 CLEC2LP0C7M8 214 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 CBLP22681 906 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 GCAP28676 217 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 RBL1P28749 1068 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 SOX5P35711 763 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 MTHFRP42898 656 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 NPTX2P47972 431 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 DBPQ10586 325 aaPredicted RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 ADGRE1Q14246 886 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 PLA2G4EQ3MJ16 856 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TRIM72Q6ZMU5 477 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TSPYL5Q86VY4 417 aaPredicted RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 CDR2LQ86X02 465 aaPredicted RBP11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TMEM126BQ8IUX1 230 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 OR6F1Q8NGZ6 308 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 OR8K3Q8NH51 312 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TGFBRAP1Q8WUH2 860 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 FBXW5Q969U6 566 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TSGA13Q96PP4 275 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 PCYOX1Q9UHG3 505 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 ADGRE2Q9UHX3 823 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 NRCAMQ92823 1304 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 TMEM2Q9UHN6 1383 aa11.31□□□□□ -0.6
SEMA4B-204ENST00000558065 GTPBP10A4D1E9 387 aaKnown RBP11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 DDX3YO15523 660 aaKnown RBP11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 HSPD1P10809 573 aaKnown RBP11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 SSTR3P32745 418 aaPredicted RBP11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 METAP2P50579 478 aaKnown RBP eCLIP11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ERVK-21P61565 698 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 UBE3AQ05086 875 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 NR5A1Q13285 461 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 RAB39AQ14964 217 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 RARS2Q5T160 578 aaKnown RBP11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 SYTL1Q8IYJ3 562 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ADCY4Q8NFM4 1077 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 OR2T3Q8NH03 318 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 SVIPQ8NHG7 77 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 DDX17Q92841 729 aaKnown RBP11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 CDRT15Q96T59 188 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 LGR6Q9HBX8 967 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ADAMTS1Q9UHI8 967 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 LEUTXA8MZ59 168 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 EYA2O00167 538 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ZNF213O14771 459 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ITGA2P17301 1181 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 SERPINB1P30740 379 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 GJC1P36383 396 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 TMED2Q15363 201 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ARHGAP44Q17R89 818 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ALFQ53S48 1182 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 RALGPS1Q5JS13 557 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 RHBDF2Q6PJF5 856 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 HAUS6Q7Z4H7 955 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ARMC8Q8IUR7 673 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ABHD11Q8NFV4 315 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 LRRC20Q8TCA0 184 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 MYD88Q99836 296 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 CCDC106Q9BWC9 280 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 DIABLOQ9NR28 239 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 MAPRE3Q9UPY8 281 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 STON1Q9Y6Q2 735 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 SLIT3O75094 1523 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 ATAD5Q96QE3 1844 aa11.3□□□□□ -0.6
SEMA4B-204ENST00000558065 C7orf72A4D263 438 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms