RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 LAMB3Q13751 1172 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 MIDNQ504T8 468 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 LIPMQ5VYY2 423 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 SLC39A5Q6ZMH5 540 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 TOGARAM2Q6ZUX3 1019 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 GATAD2AQ86YP4 633 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 ADGRF3Q8IZF5 1079 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 ARFGAP1Q8N6T3 406 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 ZNF527Q8NB42 609 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 FAM71BQ8TC56 605 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 WDR60Q8WVS4 1066 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 ZFPM2Q8WW38 1151 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 KAT2BQ92831 832 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 CRB3Q9BUF7 120 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 WDR12Q9GZL7 423 aaKnown RBP5.61□□□□□ -1.51
GPHN-215ENST00000557654 TP63Q9H3D4 680 aaPredicted RBP5.61□□□□□ -1.51
GPHN-215ENST00000557654 AAMDCQ9H7C9 122 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 ZBTB40Q9NUA8 1239 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 MSRB1Q9NZV6 116 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 HS3ST3B1Q9Y662 390 aa5.61□□□□□ -1.51
GPHN-215ENST00000557654 TRBV5-3A0A0A0MS03 114 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 ABHD14A-ACY1A0A1B0GW23 586 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 GOLGA6L3A6NEY3 463 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 F8W810 466 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 SETSIPP0DME0 302 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 PSG1P11464 419 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 TNFRSF1BP20333 461 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 ME1P48163 572 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 CCT4P50991 539 aaKnown RBP5.6□□□□□ -1.51
GPHN-215ENST00000557654 SF3A3Q12874 501 aaKnown RBP eCLIP5.6□□□□□ -1.51
GPHN-215ENST00000557654 GLE1Q53GS7 698 aaKnown RBP5.6□□□□□ -1.51
GPHN-215ENST00000557654 NOL8Q76FK4 1167 aaKnown RBP5.6□□□□□ -1.51
GPHN-215ENST00000557654 NRSN1Q8IZ57 195 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 ATG16L2Q8NAA4 619 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 BCAS4Q8TDM0 211 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 CLEC4CQ8WTT0 213 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 EME1Q96AY2 570 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 SLC39A13Q96H72 371 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 VCPIP1Q96JH7 1222 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 TRMOQ9BU70 441 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 OSBPL5Q9H0X9 879 aaPredicted RBP5.6□□□□□ -1.51
GPHN-215ENST00000557654 UTS2RQ9UKP6 389 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 LRCH1Q9Y2L9 728 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 DAAM1Q9Y4D1 1078 aa5.6□□□□□ -1.51
GPHN-215ENST00000557654 A0A0G2JK05 382 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 FAM90A18PA6NE21 464 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 FAM90A16PA6NEW6 464 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 FAM90A9PA6NNJ1 464 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 FAM90A5PA8MXJ8 464 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 ZNF814B7Z6K7 855 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 TRIM38O00635 465 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 USP12O75317 370 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 NTN1O95631 604 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 WNT1P04628 370 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 ALDOCP09972 364 aaKnown RBP5.59□□□□□ -1.51
GPHN-215ENST00000557654 FAM90A15PP0C7V4 464 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 FAM90A14PP0C7W9 464 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 GRK5P34947 590 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 LINC00205P59089 165 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 B4GALNT1Q00973 533 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 TNFAIP2Q03169 654 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 UBE4AQ14139 1066 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 PFKFB4Q16877 469 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 COLCA1Q6ZS62 124 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 EXD3Q8N9H8 876 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 C9orf106Q8NAJ2 232 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 SRFBP1Q8NEF9 429 aaKnown RBP5.59□□□□□ -1.51
GPHN-215ENST00000557654 VPS37AQ8NEZ2 397 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 MSI2Q96DH6 328 aaKnown RBP5.59□□□□□ -1.51
GPHN-215ENST00000557654 ZNF700Q9H0M5 742 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 SEPSECSQ9HD40 501 aaKnown RBP5.59□□□□□ -1.51
GPHN-215ENST00000557654 PAPOLBQ9NRJ5 636 aaKnown RBP5.59□□□□□ -1.51
GPHN-215ENST00000557654 POT1Q9NUX5 634 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 IPO11Q9UI26 975 aaKnown RBP5.59□□□□□ -1.51
GPHN-215ENST00000557654 CNTN6Q9UQ52 1028 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 ZBTB1Q9Y2K1 713 aa5.59□□□□□ -1.51
GPHN-215ENST00000557654 CCDC194A0A1B0GVG4 234 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 SLC38A8A6NNN8 435 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 H3BNX3 289 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 ALDOAP04075 364 aaKnown RBP5.58□□□□□ -1.52
GPHN-215ENST00000557654 CENPBP07199 599 aaPredicted RBP5.58□□□□□ -1.52
GPHN-215ENST00000557654 FGF2P09038 288 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 TGM2P21980 687 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 HTR3AP46098 478 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 PTK2BQ14289 1009 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 PUM3Q15397 648 aaKnown RBP5.58□□□□□ -1.52
GPHN-215ENST00000557654 SMTNL2Q2TAL5 461 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 LEXMQ3ZCV2 418 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 C1orf228Q6PIY5 440 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 MMP21Q8N119 569 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 HMGB4Q8WW32 186 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 KAT2AQ92830 837 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 TUBB6Q9BUF5 446 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 SORBS1Q9BX66 1292 aaKnown RBP5.58□□□□□ -1.52
GPHN-215ENST00000557654 SEMA4BQ9NPR2 832 aaPredicted RBP5.58□□□□□ -1.52
GPHN-215ENST00000557654 THSD1Q9NS62 852 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 LZTS1Q9Y250 596 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 SQORQ9Y6N5 450 aa5.58□□□□□ -1.52
GPHN-215ENST00000557654 TBC1D3DA0A087WVF3 549 aa5.57□□□□□ -1.52
GPHN-215ENST00000557654 TBC1D3IA0A087WXS9 549 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 189.4 ms