RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 LUZP1Q86V48 1076 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 RASSF3Q86WH2 238 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 GAS2L3Q86XJ1 694 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 SFTPA1Q8IWL2 248 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 MDGA1Q8NFP4 955 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 SLC20A1Q8WUM9 679 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 AGPAT1Q99943 283 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 SELENOOQ9BVL4 669 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 TPSD1Q9BZJ3 242 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 EDEM3Q9BZQ6 932 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 NUCKS1Q9H1E3 243 aaKnown RBP14.3□□□□□ -0.12
VPS33B-206ENST00000557358 ABCB8Q9NUT2 735 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 ADAM22Q9P0K1 906 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 KIAA1522Q9P206 1035 aaPredicted RBP14.3□□□□□ -0.12
VPS33B-206ENST00000557358 THAP10Q9P2Z0 257 aaPredicted RBP14.3□□□□□ -0.12
VPS33B-206ENST00000557358 USP18Q9UMW8 372 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 STON1Q9Y6Q2 735 aa14.3□□□□□ -0.12
VPS33B-206ENST00000557358 VPS13AQ96RL7 3174 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 TEX33O43247 280 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 ADAM23O75077 832 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 LUC7L3O95232 432 aaKnown RBP14.29□□□□□ -0.12
VPS33B-206ENST00000557358 ASLP04424 464 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 MMP8P22894 467 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 SDC4P31431 198 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 SLC6A4P31645 630 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 NNMTP40261 264 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 FANCCQ00597 558 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 SRSF5Q13243 272 aaKnown RBP14.29□□□□□ -0.12
VPS33B-206ENST00000557358 ARL13BQ3SXY8 428 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 SFMBT2Q5VUG0 894 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 NADSYN1Q6IA69 706 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 TMEM92Q6UXU6 159 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 SLC36A4Q6YBV0 504 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 VPS36Q86VN1 386 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 FIBINQ8TAL6 211 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 RPRD1AQ96P16 312 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-206ENST00000557358 GABRG3Q99928 467 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 C11orf70Q9BRQ4 267 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 ZDHHC4Q9NPG8 344 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 POLR3BQ9NW08 1133 aaPredicted RBP14.29□□□□□ -0.12
VPS33B-206ENST00000557358 CACNA2D2Q9NY47 1150 aa14.29□□□□□ -0.12
VPS33B-206ENST00000557358 DLDP09622 509 aaKnown RBP14.28□□□□□ -0.12
VPS33B-206ENST00000557358 ACADMP11310 421 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 KRT3P12035 628 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 SDHBP21912 280 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 HLA-FP30511 346 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 RDXP35241 583 aaKnown RBP14.28□□□□□ -0.12
VPS33B-206ENST00000557358 DPP6P42658 865 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 RPS24P62847 133 aaKnown RBP14.28□□□□□ -0.12
VPS33B-206ENST00000557358 CENPCQ03188 943 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 SLC12A1Q13621 1099 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 ZNF234Q14588 700 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 CLEC16AQ2KHT3 1053 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 OTOGLQ3ZCN5 2332 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 MBLAC2Q68D91 279 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 KIAA1324Q6UXG2 1013 aaKnown RBP14.28□□□□□ -0.12
VPS33B-206ENST00000557358 LPCAT2Q7L5N7 544 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 FAM160A2Q8N612 972 aaPredicted RBP14.28□□□□□ -0.12
VPS33B-206ENST00000557358 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.28□□□□□ -0.12
VPS33B-206ENST00000557358 RNF214Q8ND24 703 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 SLC30A5Q8TAD4 765 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 PGAP3Q96FM1 320 aaPredicted RBP14.28□□□□□ -0.12
VPS33B-206ENST00000557358 NPY6RQ99463 290 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 FBRSQ9HAH7 460 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 METTL5Q9NRN9 209 aaKnown RBP14.28□□□□□ -0.12
VPS33B-206ENST00000557358 SUN2Q9UH99 717 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 PCDHGA5Q9Y5G8 931 aa14.28□□□□□ -0.12
VPS33B-206ENST00000557358 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-206ENST00000557358 A0A1B0GVM2 712 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 TCAF2A6NFQ2 919 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 CBFA2T2O43439 604 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 EPHX1P07099 455 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 UNGP13051 313 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-206ENST00000557358 PDGFRAP16234 1089 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 CXCR3P49682 368 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 LMNB2Q03252 620 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 SULT2A1Q06520 285 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 C1QBPQ07021 282 aaKnown RBP14.27□□□□□ -0.13
VPS33B-206ENST00000557358 KLHL30Q0D2K2 578 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 SFSWAPQ12872 951 aaKnown RBP14.27□□□□□ -0.13
VPS33B-206ENST00000557358 ZNF177Q13360 481 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-206ENST00000557358 DNAJC24Q6P3W2 148 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 KBTBD6Q86V97 674 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 PHF13Q86YI8 300 aaPredicted RBP14.27□□□□□ -0.13
VPS33B-206ENST00000557358 KIAA2013Q8IYS2 634 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 CFAP52Q8N1V2 620 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 ZC3H10Q96K80 434 aaKnown RBP14.27□□□□□ -0.13
VPS33B-206ENST00000557358 ACOX2Q99424 681 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 TKTL2Q9H0I9 626 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 SIK2Q9H0K1 926 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 RBSNQ9H1K0 784 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 CLEC4EQ9ULY5 219 aa14.27□□□□□ -0.13
VPS33B-206ENST00000557358 THADAQ6YHU6 1953 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 LRRC53A6NM62 1247 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 PRR5-ARHGAP8B1AHC4 643 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 AP5Z1O43299 807 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 RNASEH1O60930 286 aaKnown RBP14.26□□□□□ -0.13
VPS33B-206ENST00000557358 NDUFS2O75306 463 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 PAGE1O75459 146 aa14.26□□□□□ -0.13
VPS33B-206ENST00000557358 CLDN11O75508 207 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms