RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 MSANTD2Q6P1R3 559 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 ADHFE1Q8IWW8 467 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 DDIASQ8IXT1 998 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 SPATA3Q8NHX4 192 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 TMEM174Q8WUU8 243 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 NPIPB3Q92617 1050 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 ZNF347Q96SE7 839 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 TBCBQ99426 244 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 TMEM204Q9BSN7 226 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 EIF2AQ9BY44 585 aaKnown RBP4.79□□□□□ -1.64
VRK1-207ENST00000557352 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.79□□□□□ -1.64
VRK1-207ENST00000557352 PRDM16Q9HAZ2 1276 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 FSCN3Q9NQT6 498 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 FBXO28Q9NVF7 368 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 KLHL42Q9P2K6 505 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 PROCRQ9UNN8 238 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 LAMP3Q9UQV4 416 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 FAM50BQ9Y247 325 aa4.79□□□□□ -1.64
VRK1-207ENST00000557352 GXYLT2A0PJZ3 443 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 FAM234BA2RU67 622 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 DPPA5A6NC42 116 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 PPP6R2O75170 966 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 NGFRP08138 427 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 ZXDBP98169 803 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 IFIT5Q13325 482 aaKnown RBP4.78□□□□□ -1.64
VRK1-207ENST00000557352 KIAA1755Q5JYT7 1200 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 HIBCHQ6NVY1 386 aaPredicted RBP4.78□□□□□ -1.64
VRK1-207ENST00000557352 TXLNBQ8N3L3 684 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 OR52N4Q8NGI2 321 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 CENPIQ92674 756 aaPredicted RBP4.78□□□□□ -1.64
VRK1-207ENST00000557352 ABHD14AQ9BUJ0 271 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 RBM38Q9H0Z9 239 aaKnown RBP4.78□□□□□ -1.64
VRK1-207ENST00000557352 STARD7Q9NQZ5 370 aa4.78□□□□□ -1.64
VRK1-207ENST00000557352 UBE2J1Q9Y385 318 aaPredicted RBP4.78□□□□□ -1.64
VRK1-207ENST00000557352 NOTCH4Q99466 2003 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 H0YGN5 161 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 J3KTA2 159 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 RHODO00212 210 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 TAF5LO75529 589 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 CNTN5O94779 1100 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 ITGA5P08648 1049 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 HARSP12081 509 aaKnown RBP4.77□□□□□ -1.65
VRK1-207ENST00000557352 PLA2G2AP14555 144 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 CIITAP33076 1130 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 RGS19P49795 217 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 SLC37A1P57057 533 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 GAD2Q05329 585 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 PMS2P11Q13670 270 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 COBLL1Q53SF7 1204 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 LRIG3Q6UXM1 1119 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 RASGRP3Q8IV61 690 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 SRFBP1Q8NEF9 429 aaKnown RBP4.77□□□□□ -1.65
VRK1-207ENST00000557352 SLC22A17Q8WUG5 538 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 LPAR1Q92633 364 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 CLMNQ96JQ2 1002 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 PAAF1Q9BRP4 392 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 ARHGAP39Q9C0H5 1083 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 MYLK2Q9H1R3 596 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 SLCO5A1Q9H2Y9 848 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 KCNK9Q9NPC2 374 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 EVPLQ92817 2033 aa4.77□□□□□ -1.65
VRK1-207ENST00000557352 TRIP12Q14669 1992 aaPredicted RBP4.76□□□□□ -1.65
VRK1-207ENST00000557352 PNMA6EA0A0J9YXQ4 647 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 PRSS44E7EML9 344 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 TNFRSF13BO14836 293 aaPredicted RBP4.76□□□□□ -1.65
VRK1-207ENST00000557352 IFNA2P01563 188 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 TGM2P21980 687 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 CSHL1Q14406 222 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 DLK2Q6UY11 383 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 SLC39A5Q6ZMH5 540 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 TTC30AQ86WT1 665 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 INPP5DQ92835 1189 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 MIB2Q96AX9 1013 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 SARGQ9BW04 601 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 SPAG4Q9NPE6 437 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 PCDHA7Q9UN72 937 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 SLC8A2Q9UPR5 921 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 DTNAQ9Y4J8 743 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 PCDHB7Q9Y5E2 793 aa4.76□□□□□ -1.65
VRK1-207ENST00000557352 NCK2O43639 380 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 TGFB3P10600 412 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 TNFRSF8P28908 595 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 HOXA11P31270 313 aaPredicted RBP4.75□□□□□ -1.65
VRK1-207ENST00000557352 SAFBQ15424 915 aaKnown RBP eCLIP4.75□□□□□ -1.65
VRK1-207ENST00000557352 SLC35G1Q2M3R5 365 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 FAM209BQ5JX69 171 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 WDR93Q6P2C0 686 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 C18orf65Q6ZTR6 163 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 FBXL14Q8N1E6 418 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 PAQR4Q8N4S7 273 aaPredicted RBP4.75□□□□□ -1.65
VRK1-207ENST00000557352 EXD3Q8N9H8 876 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 OIT3Q8WWZ8 545 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 BRI3BPQ8WY22 251 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 FAR2Q96K12 515 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 NTPCRQ9BSD7 190 aaKnown RBP4.75□□□□□ -1.65
VRK1-207ENST00000557352 NAA15Q9BXJ9 866 aaKnown RBP4.75□□□□□ -1.65
VRK1-207ENST00000557352 TASP1Q9H6P5 420 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 HELLSQ9NRZ9 838 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 CA14Q9ULX7 337 aa4.75□□□□□ -1.65
VRK1-207ENST00000557352 SCRIBQ14160 1630 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms