RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RPS24P62847 133 aaKnown RBP12.92□□□□□ -0.34
SLIRP-209ENST00000557342 CDH18Q13634 790 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 GEN1Q17RS7 908 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 TDRD12Q587J7 1177 aaKnown RBP12.92□□□□□ -0.34
SLIRP-209ENST00000557342 RABGAP1LQ5R372 815 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 OTUD1Q5VV17 481 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-209ENST00000557342 EGFLAMQ63HQ2 1017 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 SPECC1LQ69YQ0 1117 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 HEATR6Q6AI08 1181 aaKnown RBP12.92□□□□□ -0.34
SLIRP-209ENST00000557342 DNAJC24Q6P3W2 148 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 ZNF571Q7Z3V5 609 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-209ENST00000557342 BNIPLQ7Z465 357 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 CHPFQ8IZ52 775 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 MCOLN2Q8IZK6 566 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.92□□□□□ -0.34
SLIRP-209ENST00000557342 FIBINQ8TAL6 211 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 RXFP2Q8WXD0 754 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 CFAP57Q96MR6 1250 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 PRICKLE1Q96MT3 831 aaPredicted RBP12.92□□□□□ -0.34
SLIRP-209ENST00000557342 PRMT1Q99873 361 aaKnown RBP12.92□□□□□ -0.34
SLIRP-209ENST00000557342 TKTL2Q9H0I9 626 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 ELOVL2Q9NXB9 296 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 GGA2Q9UJY4 613 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 CLEC4EQ9ULY5 219 aa12.92□□□□□ -0.34
SLIRP-209ENST00000557342 ANTXRLA6NF34 631 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 C2CD4BA6NLJ0 364 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 H0Y626 953 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 AXIN1O15169 862 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 ZBTB24O43167 697 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 ADAM23O75077 832 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 RTN2O75298 545 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 PAGE1O75459 146 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 ENDOD1O94919 500 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 LUC7L3O95232 432 aaKnown RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 LMNAP02545 664 aaKnown RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 GYPCP04921 128 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 SERPING1P05155 500 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 TPM1P09493 284 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 PABPC1P11940 636 aaKnown RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 SKILP12757 684 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 HOXB2P14652 356 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 TFE3P19532 575 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 GPD1P21695 349 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 HLA-FP30511 346 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 PTPN9P43378 593 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 MRE11P49959 708 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 OXCT1P55809 520 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 DMWDQ09019 674 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 ARL13BQ3SXY8 428 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 E4F1Q66K89 784 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 TRNP1Q6NT89 227 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 CHST9Q7L1S5 443 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 STRADAQ7RTN6 431 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 KIAA0907Q7Z7F0 614 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 PHLDB2Q86SQ0 1253 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 CFAP52Q8N1V2 620 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 CARNMT1Q8N4J0 409 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 EMC1Q8N766 993 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 JOSD2Q8TAC2 188 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 CIPCQ9C0C6 399 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 ABCB8Q9NUT2 735 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 POLR3BQ9NW08 1133 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 CALCOCO1Q9P1Z2 691 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 KIAA1522Q9P206 1035 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 THAP10Q9P2Z0 257 aaPredicted RBP12.91□□□□□ -0.34
SLIRP-209ENST00000557342 HS3ST4Q9Y661 456 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 PLXND1Q9Y4D7 1925 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 CKAP5Q14008 2032 aa12.91□□□□□ -0.34
SLIRP-209ENST00000557342 CACNA1HO95180 2353 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 A0A1B0GVM2 712 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 TCRBV5S1A1TA0A578 114 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 PRR23AA6NEV1 266 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 TCAF2A6NFQ2 919 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 TMCO5BA8MYB1 307 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 GFRA3O60609 400 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 MOCS3O95396 460 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 ADCY5O95622 1261 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 FTLP02792 175 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-209ENST00000557342 ATP5BP06576 529 aaKnown RBP12.9□□□□□ -0.34
SLIRP-209ENST00000557342 POLR2EP19388 210 aaKnown RBP12.9□□□□□ -0.34
SLIRP-209ENST00000557342 CASP14P31944 242 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 RFC1P35251 1148 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-209ENST00000557342 ATP11AP98196 1134 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 SLC12A1Q13621 1099 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 AUHQ13825 339 aaKnown RBP12.9□□□□□ -0.34
SLIRP-209ENST00000557342 CDO1Q16878 200 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 CCDC14Q49A88 953 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 HGSNATQ68CP4 663 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 FBXL22Q6P050 247 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 DCUN1D2Q6PH85 259 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 WDR59Q6PJI9 974 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 TMEM92Q6UXU6 159 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 LRRC31Q6UY01 552 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 RASSF3Q86WH2 238 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 MYEOVQ96EZ4 313 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 TRIM11Q96F44 468 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 C1orf74Q96LT6 269 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 RPRD1AQ96P16 312 aaPredicted RBP12.9□□□□□ -0.34
SLIRP-209ENST00000557342 HAPLN3Q96S86 360 aa12.9□□□□□ -0.34
SLIRP-209ENST00000557342 PPP1R9BQ96SB3 815 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms